Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001702A_C02 KMC001702A_c02
(691 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566436.1| expressed protein; protein id: At3g12760.1, sup... 100 1e-27
gb|AAK93603.1| unknown protein [Arabidopsis thaliana] 100 1e-27
ref|NP_648777.1| CG7427-PA [Drosophila melanogaster] gi|21392174... 84 1e-15
gb|EAA09241.1| agCP14040 [Anopheles gambiae str. PEST] 74 1e-12
dbj|BAA90944.1| unnamed protein product [Homo sapiens] 70 2e-11
>ref|NP_566436.1| expressed protein; protein id: At3g12760.1, supported by cDNA:
gi_15292984 [Arabidopsis thaliana]
gi|11994418|dbj|BAB02420.1|
gb|AAF04863.1~gene_id:MBK21.14~similar to unknown
protein [Arabidopsis thaliana]
gi|23297357|gb|AAN12949.1| unknown protein [Arabidopsis
thaliana]
Length = 250
Score = 99.8 bits (247), Expect(2) = 1e-27
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = -1
Query: 634 PWFDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLIDEFVEYLNEN 455
P HWC FLQ RHNKAIS+DTW+QLLEF++ V LS+YDAEGAWPYLIDEFVEYL +
Sbjct: 186 PLVTHWCDFLQDRHNKAISKDTWAQLLEFSRMVDPVLSNYDAEGAWPYLIDEFVEYLYDK 245
Query: 454 GITQ 443
+ +
Sbjct: 246 NVVE 249
Score = 45.8 bits (107), Expect(2) = 1e-27
Identities = 19/21 (90%), Positives = 21/21 (99%)
Frame = -3
Query: 689 ALDTAIGMWQLLFAEKQWPLV 627
ALDTAIGMWQLLFAE++WPLV
Sbjct: 168 ALDTAIGMWQLLFAEREWPLV 188
>gb|AAK93603.1| unknown protein [Arabidopsis thaliana]
Length = 250
Score = 99.8 bits (247), Expect(2) = 1e-27
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = -1
Query: 634 PWFDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLIDEFVEYLNEN 455
P HWC FLQ RHNKAIS+DTW+QLLEF++ V LS+YDAEGAWPYLIDEFVEYL +
Sbjct: 186 PLVTHWCDFLQDRHNKAISKDTWAQLLEFSRMVDPVLSNYDAEGAWPYLIDEFVEYLYDK 245
Query: 454 GITQ 443
+ +
Sbjct: 246 NVVE 249
Score = 45.8 bits (107), Expect(2) = 1e-27
Identities = 19/21 (90%), Positives = 21/21 (99%)
Frame = -3
Query: 689 ALDTAIGMWQLLFAEKQWPLV 627
ALDTAIGMWQLLFAE++WPLV
Sbjct: 168 ALDTAIGMWQLLFAEREWPLV 188
>ref|NP_648777.1| CG7427-PA [Drosophila melanogaster] gi|21392174|gb|AAM48441.1|
RE66446p [Drosophila melanogaster]
gi|23093415|gb|AAF49617.2| CG7427-PA [Drosophila
melanogaster]
Length = 288
Score = 84.3 bits (207), Expect = 1e-15
Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -1
Query: 658 YYSLRSSG--PWFDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLI 485
Y+ + SG + D WCQFL+ +H +AISRDTW+ LL+FA + +S+YD+EGAWP LI
Sbjct: 177 YWCIVLSGRFKFLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLI 236
Query: 484 DEFVEYLNEN 455
D+FVE+ EN
Sbjct: 237 DDFVEWCQEN 246
>gb|EAA09241.1| agCP14040 [Anopheles gambiae str. PEST]
Length = 248
Score = 74.3 bits (181), Expect = 1e-12
Identities = 30/55 (54%), Positives = 42/55 (75%)
Frame = -1
Query: 631 WFDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLIDEFVEY 467
+ D WC+FL H ++I +DTW+ LL+FA + S+S+YDAEGAWP LID+FVE+
Sbjct: 188 FLDLWCKFLVENHKRSIPKDTWNLLLDFATYIDDSMSNYDAEGAWPVLIDDFVEW 242
>dbj|BAA90944.1| unnamed protein product [Homo sapiens]
Length = 126
Score = 70.5 bits (171), Expect = 2e-11
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = -1
Query: 658 YYSLRSSG--PWFDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLI 485
Y+ L SG + D W FL H ++I RDTW+ LL+F + +S+YD EGAWP LI
Sbjct: 48 YWKLVLSGRFKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLI 107
Query: 484 DEFVEY 467
D+FVEY
Sbjct: 108 DDFVEY 113
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 582,622,843
Number of Sequences: 1393205
Number of extensions: 11738365
Number of successful extensions: 26781
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 26046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26773
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31118763720
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
