Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001698A_C01 KMC001698A_c01
(686 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172889.1| protein kinase; protein id: At1g14370.1, suppor... 129 5e-29
ref|NP_178383.1| putative protein kinase; protein id: At2g02800.... 128 8e-29
dbj|BAC42058.1| putative protein kinase [Arabidopsis thaliana] 127 1e-28
gb|AAL84315.1|AC073556_32 putative protein tyrosine-serine-threo... 125 4e-28
ref|NP_177137.1| putative protein kinase; protein id: At1g69790.... 124 9e-28
>ref|NP_172889.1| protein kinase; protein id: At1g14370.1, supported by cDNA:
gi_12248034, supported by cDNA: gi_16649048, supported
by cDNA: gi_2852446 [Arabidopsis thaliana]
gi|25287626|pir||T52285 serine/threonine-specific
protein kinase APK2a (EC 2.7.1.-) [imported] -
Arabidopsis thaliana gi|2852447|dbj|BAA24694.1| protein
kinase [Arabidopsis thaliana]
gi|7262679|gb|AAF43937.1|AC012188_14 Strong similarity,
practically identical, to APK2a protein from Arabidopsis
thaliana gb|D88206 and contains a Eukaryotic protein
kinase PF|00069 domain. ESTs gb|AA712684, gb|H76755,
gb|AA651227 come from this gene
gi|12248035|gb|AAG50109.1|AF334731_1 putative protein
kinase [Arabidopsis thaliana] gi|16649049|gb|AAL24376.1|
Strong similarity to APK2a protein [Arabidopsis
thaliana]
Length = 426
Score = 129 bits (323), Expect = 5e-29
Identities = 70/122 (57%), Positives = 88/122 (71%)
Frame = -1
Query: 686 RSDVYSFGVVLLELLTGRRALEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYS 507
+SDVYSFGVVLLEL++GRRA+++ G +E +LVDWA P+L D R++ RIMDT+LGGQY
Sbjct: 276 KSDVYSFGVVLLELISGRRAMDNSNGG-NEYSLVDWATPYLGDKRKLFRIMDTKLGGQYP 334
Query: 506 KKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHSLNSIPRTPKSGIESHTNRHFGHA 327
+KGA AA+LALQCLN D K RP M EVL TLE L S+ + P T + +ES H
Sbjct: 335 QKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESV-AKPGTKHTQMESPRFHHSSVM 393
Query: 326 QK 321
QK
Sbjct: 394 QK 395
>ref|NP_178383.1| putative protein kinase; protein id: At2g02800.1, supported by
cDNA: gi_16226562, supported by cDNA: gi_2852448
[Arabidopsis thaliana] gi|7434289|pir||T00848 probable
serine/threonine-specific protein kinase T20F6.6 (EC
2.7.1.-) - Arabidopsis thaliana
gi|2852449|dbj|BAA24695.1| protein kinase [Arabidopsis
thaliana] gi|2947061|gb|AAC05342.1| putative protein
kinase [Arabidopsis thaliana]
gi|16226563|gb|AAL16201.1|AF428432_1 At2g02800/T20F6.6
[Arabidopsis thaliana] gi|21928081|gb|AAM78069.1|
At2g02800/T20F6.6 [Arabidopsis thaliana]
Length = 426
Score = 128 bits (321), Expect = 8e-29
Identities = 65/97 (67%), Positives = 78/97 (80%)
Frame = -1
Query: 686 RSDVYSFGVVLLELLTGRRALEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYS 507
+SDVYSFGVVLLELL+GRRA++ + G+ E++LVDWA P+L D R++ RIMDTRLGGQY
Sbjct: 273 KSDVYSFGVVLLELLSGRRAVDKSKVGM-EQSLVDWATPYLGDKRKLFRIMDTRLGGQYP 331
Query: 506 KKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHS 396
+KGA AASLALQCLN D K RP M EVLA L+ L S
Sbjct: 332 QKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLES 368
>dbj|BAC42058.1| putative protein kinase [Arabidopsis thaliana]
Length = 426
Score = 127 bits (320), Expect = 1e-28
Identities = 65/97 (67%), Positives = 78/97 (80%)
Frame = -1
Query: 686 RSDVYSFGVVLLELLTGRRALEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYS 507
+SDVYSFGVVLLELL+GRRA++ + G+ E++LVDWA P+L D R++ RIMDTRLGGQY
Sbjct: 273 KSDVYSFGVVLLELLSGRRAVDRSKVGM-EQSLVDWATPYLGDKRKLFRIMDTRLGGQYP 331
Query: 506 KKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHS 396
+KGA AASLALQCLN D K RP M EVLA L+ L S
Sbjct: 332 QKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLES 368
>gb|AAL84315.1|AC073556_32 putative protein tyrosine-serine-threonine kinase [Oryza sativa
(japonica cultivar-group)]
Length = 422
Score = 125 bits (315), Expect = 4e-28
Identities = 65/114 (57%), Positives = 80/114 (70%)
Frame = -1
Query: 686 RSDVYSFGVVLLELLTGRRALEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYS 507
++DVYSFGVVLLELLTGRRAL+ +PG+ E+ LVDWA P L D RR+ R+MDT+LGGQY
Sbjct: 277 KADVYSFGVVLLELLTGRRALDKSKPGI-EQNLVDWAKPHLGDKRRLYRVMDTKLGGQYP 335
Query: 506 KKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHSLNSIPRTPKSGIESHTN 345
KKGA A A++ALQC+ D K RP M EVL LE L +P+ I +N
Sbjct: 336 KKGAHAIANIALQCICNDAKMRPRMSEVLEELEQLQDSKYNMASPQVDIRRTSN 389
>ref|NP_177137.1| putative protein kinase; protein id: At1g69790.1 [Arabidopsis
thaliana] gi|25287616|pir||A96720 hypothetical protein
T6C23.1 [imported] - Arabidopsis thaliana
gi|12325185|gb|AAG52536.1|AC013289_3 putative protein
kinase; 3853-2084 [Arabidopsis thaliana]
Length = 376
Score = 124 bits (312), Expect = 9e-28
Identities = 62/97 (63%), Positives = 78/97 (79%)
Frame = -1
Query: 686 RSDVYSFGVVLLELLTGRRALEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYS 507
+SDVYSFGVVLLELL+GR L+ + GV E LVDWA+P+L D R+V RIMDT+LGGQY
Sbjct: 261 KSDVYSFGVVLLELLSGRPTLDKSKVGV-ERNLVDWAIPYLVDRRKVFRIMDTKLGGQYP 319
Query: 506 KKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHS 396
KGA AAA++AL+CLNT+PK RP M +VL+TL+ L +
Sbjct: 320 HKGACAAANIALRCLNTEPKLRPDMADVLSTLQQLET 356
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,278,449
Number of Sequences: 1393205
Number of extensions: 12313018
Number of successful extensions: 38370
Number of sequences better than 10.0: 1679
Number of HSP's better than 10.0 without gapping: 35595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37545
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
