Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001691A_C02 KMC001691A_c02
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42899|GLN1_LOTJA Glutamine synthetase, cytosolic isozyme (Gl... 165 4e-40
emb|CAA73366.1| glutamine synthetase [Lotus japonicus] 165 4e-40
sp|P04770|GLN1_PHAVU Glutamine synthetase PR-1 (Gln isozyme beta... 162 2e-39
sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme (Glutam... 162 2e-39
sp|P24099|GLN1_SOYBN Glutamine synthetase cytosolic isozyme 1 (G... 162 2e-39
>sp|Q42899|GLN1_LOTJA Glutamine synthetase, cytosolic isozyme (Glutamate--ammonia ligase)
(GS1)
Length = 356
Score = 165 bits (417), Expect = 4e-40
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -2
Query: 548 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 369
EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM
Sbjct: 279 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 338
Query: 368 DPYVVTSMIADTTILWKP 315
DPYVVTSMIADTTILWKP
Sbjct: 339 DPYVVTSMIADTTILWKP 356
>emb|CAA73366.1| glutamine synthetase [Lotus japonicus]
Length = 356
Score = 165 bits (417), Expect = 4e-40
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -2
Query: 548 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 369
EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM
Sbjct: 279 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 338
Query: 368 DPYVVTSMIADTTILWKP 315
DPYVVTSMIADTTILWKP
Sbjct: 339 DPYVVTSMIADTTILWKP 356
>sp|P04770|GLN1_PHAVU Glutamine synthetase PR-1 (Gln isozyme beta) (Glutamate--ammonia
ligase) gi|68587|pir||AJFBQB glutamate-ammonia ligase
(EC 6.3.1.2) beta, cytosolic - kidney bean
gi|21011|emb|CAA27631.1| glutamine synthetase subunit
(aa 1-356) [Phaseolus vulgaris] gi|225067|prf||1208270A
synthetase R1,Gln
Length = 356
Score = 162 bits (411), Expect = 2e-39
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -2
Query: 548 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 369
EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEK GKGYFEDRRPASNM
Sbjct: 279 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNM 338
Query: 368 DPYVVTSMIADTTILWKP 315
DPYVVTSMIADTTILWKP
Sbjct: 339 DPYVVTSMIADTTILWKP 356
>sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme (Glutamate--ammonia ligase)
(GS) gi|170637|gb|AAA34239.1| glutamine synthetase
gi|1094850|prf||2106409A Gln synthetase
Length = 356
Score = 162 bits (411), Expect = 2e-39
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -2
Query: 548 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 369
EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEK GKGYFEDRRPASNM
Sbjct: 279 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNM 338
Query: 368 DPYVVTSMIADTTILWKP 315
DPYVVTSMIADTTILWKP
Sbjct: 339 DPYVVTSMIADTTILWKP 356
>sp|P24099|GLN1_SOYBN Glutamine synthetase cytosolic isozyme 1 (Glutamate--ammonia
ligase) (GS1-1) gi|81774|pir||JQ0937 glutamate-ammonia
ligase (EC 6.3.1.2), cytosolic - soybean
gi|256143|gb|AAB23379.1| cytosolic glutamine synthetase;
GS [Glycine max]
Length = 355
Score = 162 bits (410), Expect = 2e-39
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = -2
Query: 548 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNM 369
EHIAAYGEGNERRLTGRHETADINTFLWGVANRGAS+RVGRDTEK GKGYFEDRRPASNM
Sbjct: 278 EHIAAYGEGNERRLTGRHETADINTFLWGVANRGASVRVGRDTEKAGKGYFEDRRPASNM 337
Query: 368 DPYVVTSMIADTTILWKP 315
DPYVVTSMIADTTILWKP
Sbjct: 338 DPYVVTSMIADTTILWKP 355
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,357,457
Number of Sequences: 1393205
Number of extensions: 10821990
Number of successful extensions: 27381
Number of sequences better than 10.0: 311
Number of HSP's better than 10.0 without gapping: 26577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27317
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
