Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001681A_C02 KMC001681A_c02
(668 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O48561|CAT4_SOYBN Catalase 4 gi|2661021|gb|AAB88172.1| catala... 238 5e-62
pir||T06218 catalase (EC 1.11.1.6) - soybean (fragment) gi|26610... 233 2e-60
sp|P48350|CAT1_CUCPE Catalase isozyme 1 gi|862452|dbj|BAA09506.1... 232 3e-60
gb|AAD17935.1| catalase [Brassica juncea] 231 5e-60
gb|AAF71742.1|AF248491_1 catalase [Raphanus sativus] 231 7e-60
>sp|O48561|CAT4_SOYBN Catalase 4 gi|2661021|gb|AAB88172.1| catalase [Glycine max]
Length = 492
Score = 238 bits (607), Expect = 5e-62
Identities = 107/119 (89%), Positives = 114/119 (94%)
Frame = -1
Query: 668 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERYPIPPAICTGSRERCAIEKENNFKQPGE 489
NNHHEGFMNF+HRDEEVNYFPSRYDPVRHAER+PIPPAIC+G RE+C IEKENNFKQPGE
Sbjct: 374 NNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGE 433
Query: 488 RYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQKIASHLNLRPSI 312
RYRS+APDRQDRF RRWVDALSDPRVTHEIRS WISYWSQADRSLGQKIASHL+ RP+I
Sbjct: 434 RYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492
>pir||T06218 catalase (EC 1.11.1.6) - soybean (fragment)
gi|2661023|gb|AAB88173.1| catalase [Glycine max]
Length = 308
Score = 233 bits (593), Expect = 2e-60
Identities = 105/119 (88%), Positives = 113/119 (94%)
Frame = -1
Query: 668 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERYPIPPAICTGSRERCAIEKENNFKQPGE 489
NNHHEGFMNF+HRDEEVNYFPSRYDPVRHAE +PIPPAIC+G RE+C IEKENNFKQPGE
Sbjct: 190 NNHHEGFMNFIHRDEEVNYFPSRYDPVRHAETFPIPPAICSGRREKCGIEKENNFKQPGE 249
Query: 488 RYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQKIASHLNLRPSI 312
RYRS+APDRQDRF RRWVDALSDPRVTHEIRS WISYWSQADRSLGQKIAS L++RP+I
Sbjct: 250 RYRSWAPDRQDRFNRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASRLSMRPNI 308
>sp|P48350|CAT1_CUCPE Catalase isozyme 1 gi|862452|dbj|BAA09506.1| catalase [Cucurbita
pepo]
Length = 492
Score = 232 bits (592), Expect = 3e-60
Identities = 104/119 (87%), Positives = 112/119 (93%)
Frame = -1
Query: 668 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERYPIPPAICTGSRERCAIEKENNFKQPGE 489
NNHHEGFMNFMHRDEEVNYFPSR+DP RHAERYP PPA+C+G RERC IEKENNFK+PGE
Sbjct: 374 NNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGE 433
Query: 488 RYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQKIASHLNLRPSI 312
RYRS+ PDRQ+RFVRRWVDALSD RVTHEIRS WISYWSQADRSLGQK+ASHLN+RPSI
Sbjct: 434 RYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492
>gb|AAD17935.1| catalase [Brassica juncea]
Length = 492
Score = 231 bits (590), Expect = 5e-60
Identities = 99/119 (83%), Positives = 113/119 (94%)
Frame = -1
Query: 668 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERYPIPPAICTGSRERCAIEKENNFKQPGE 489
NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAE+YP PPA+C+G RERC IEKENNFK+PGE
Sbjct: 374 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKYPTPPAVCSGKRERCVIEKENNFKEPGE 433
Query: 488 RYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQKIASHLNLRPSI 312
RYRSF P+RQ+RF+RRW++ALSDPR+THEIRS WISYWSQAD++LGQK+AS LN+RPSI
Sbjct: 434 RYRSFTPERQERFIRRWIEALSDPRITHEIRSIWISYWSQADKTLGQKLASRLNVRPSI 492
>gb|AAF71742.1|AF248491_1 catalase [Raphanus sativus]
Length = 492
Score = 231 bits (589), Expect = 7e-60
Identities = 100/119 (84%), Positives = 112/119 (94%)
Frame = -1
Query: 668 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAERYPIPPAICTGSRERCAIEKENNFKQPGE 489
NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAE+YP PPA+C+G RERC IEKENNFK+PGE
Sbjct: 374 NNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGE 433
Query: 488 RYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQKIASHLNLRPSI 312
RYRSF P+RQ+RF+ RW+DALSDPR+THEIRS WISYWSQAD+SLGQK+AS LN+RPSI
Sbjct: 434 RYRSFTPERQERFIGRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 608,270,919
Number of Sequences: 1393205
Number of extensions: 13467361
Number of successful extensions: 33319
Number of sequences better than 10.0: 158
Number of HSP's better than 10.0 without gapping: 32067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33272
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
