Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001667A_C01 KMC001667A_c01
(460 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea br... 89 1e-20
ref|NP_199583.1| acetoacyl-CoA-thiolase; protein id: At5g47720.1... 83 7e-19
pir||T10247 acetyl-CoA C-acetyltransferase (EC 2.3.1.9), cytosol... 84 7e-16
dbj|BAB39872.1| putative acetoacyl-CoA-thiolase [Oryza sativa (j... 70 9e-16
dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thal... 84 9e-16
>gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea brasiliensis]
Length = 411
Score = 88.6 bits (218), Expect(2) = 1e-20
Identities = 40/46 (86%), Positives = 44/46 (94%)
Frame = -2
Query: 459 NPEKVNVHGGAVSLGHPLGCSGARILVTLLGVLRQKSGRYGVGAIC 322
NPEK+NVHGGAVSLGHPLGCSGARILVTLLGVLR K+G+YGV +IC
Sbjct: 342 NPEKLNVHGGAVSLGHPLGCSGARILVTLLGVLRHKNGKYGVASIC 387
Score = 31.6 bits (70), Expect(2) = 1e-20
Identities = 16/24 (66%), Positives = 19/24 (78%)
Frame = -3
Query: 320 HGGGGASALVVELMSGATLRRSSL 249
+GGGGASALV+ELMS + RS L
Sbjct: 388 NGGGGASALVLELMSVGRVGRSLL 411
>ref|NP_199583.1| acetoacyl-CoA-thiolase; protein id: At5g47720.1, supported by cDNA:
93821. [Arabidopsis thaliana]
gi|10177908|dbj|BAB11319.1| acetoacyl-CoA-thiolase
[Arabidopsis thaliana] gi|21618008|gb|AAM67058.1|
acetoacyl-CoA-thiolase [Arabidopsis thaliana]
Length = 415
Score = 83.2 bits (204), Expect(2) = 7e-19
Identities = 37/46 (80%), Positives = 42/46 (90%)
Frame = -2
Query: 459 NPEKVNVHGGAVSLGHPLGCSGARILVTLLGVLRQKSGRYGVGAIC 322
+PE++N HGGAVSLGHPLGCSGARILVTLLGVLR K G+YGV +IC
Sbjct: 346 DPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASIC 391
Score = 31.2 bits (69), Expect(2) = 7e-19
Identities = 15/24 (62%), Positives = 19/24 (78%)
Frame = -3
Query: 320 HGGGGASALVVELMSGATLRRSSL 249
+GGGGASALV+E MS T+ S+L
Sbjct: 392 NGGGGASALVLEFMSEKTIGYSAL 415
>pir||T10247 acetyl-CoA C-acetyltransferase (EC 2.3.1.9), cytosolic - radish
gi|1542941|emb|CAA55006.1| Acetoacetyl-coenzyme A
thiolase [Raphanus sativus]
Length = 406
Score = 84.0 bits (206), Expect = 7e-16
Identities = 35/46 (76%), Positives = 45/46 (97%)
Frame = -2
Query: 459 NPEKVNVHGGAVSLGHPLGCSGARILVTLLGVLRQKSGRYGVGAIC 322
+PEKVNV+GGAVSLGHPLGCSGARIL+TLLG+L++++G+YGVG +C
Sbjct: 347 SPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVC 392
>dbj|BAB39872.1| putative acetoacyl-CoA-thiolase [Oryza sativa (japonica
cultivar-group)]
Length = 416
Score = 69.7 bits (169), Expect(2) = 9e-16
Identities = 29/43 (67%), Positives = 37/43 (85%)
Frame = -2
Query: 450 KVNVHGGAVSLGHPLGCSGARILVTLLGVLRQKSGRYGVGAIC 322
K+N+ GG VSLGHP+GCSGARI+VTLLG+LR K+G+ GV +C
Sbjct: 350 KLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKNGKIGVAGVC 392
Score = 34.3 bits (77), Expect(2) = 9e-16
Identities = 17/24 (70%), Positives = 19/24 (78%)
Frame = -3
Query: 320 HGGGGASALVVELMSGATLRRSSL 249
+GGGGASALVVELM + RSSL
Sbjct: 393 NGGGGASALVVELMQPSLFTRSSL 416
>dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thaliana]
Length = 486
Score = 83.6 bits (205), Expect = 9e-16
Identities = 35/45 (77%), Positives = 44/45 (97%)
Frame = -2
Query: 456 PEKVNVHGGAVSLGHPLGCSGARILVTLLGVLRQKSGRYGVGAIC 322
PEKVNV+GGAVSLGHPLGCSGARIL+TLLG+L++++G+YGVG +C
Sbjct: 428 PEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVC 472
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,107,187
Number of Sequences: 1393205
Number of extensions: 9068363
Number of successful extensions: 28211
Number of sequences better than 10.0: 576
Number of HSP's better than 10.0 without gapping: 26452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28122
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
