Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001665A_C01 KMC001665A_c01
(644 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL62332.1|AF461048_1 aminotransferase 2 [Cucumis melo] 279 2e-74
gb|AAL47679.1| aminotransferase 1 [Cucumis melo] 277 8e-74
gb|AAB95218.1| putative serine-glyoxylate aminotransferase [Frit... 271 5e-72
ref|NP_178969.1| alanine-glyoxylate aminotransferase; protein id... 260 1e-68
emb|CAD13310.1| serine-glyoxylate aminotransferase [Methylobacte... 176 2e-43
>gb|AAL62332.1|AF461048_1 aminotransferase 2 [Cucumis melo]
Length = 401
Score = 279 bits (714), Expect = 2e-74
Identities = 135/150 (90%), Positives = 145/150 (96%)
Frame = -2
Query: 643 SIQLLYGLREALDLIFEEGLDNVILRHKRLGHATRLAVEAWGLKNCTQKEEWYSDTVTAV 464
SIQLLYGLR ALDL+FEEGL+NVI RHKRLG ATRLAVEAWGLKNCTQKEEW+SDTVTAV
Sbjct: 252 SIQLLYGLRPALDLVFEEGLENVIARHKRLGQATRLAVEAWGLKNCTQKEEWHSDTVTAV 311
Query: 463 LVPPYIDAAEVVRRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILN 284
+VPPYID+AE+VRR+WKRYN+SLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMIL
Sbjct: 312 VVPPYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILK 371
Query: 283 DVGYPVKLGSGVAAASAYFQNNIPMIPSRI 194
DVGYPVKLGSGVAAAS+Y QNNIP+IPSRI
Sbjct: 372 DVGYPVKLGSGVAAASSYLQNNIPLIPSRI 401
>gb|AAL47679.1| aminotransferase 1 [Cucumis melo]
Length = 401
Score = 277 bits (709), Expect = 8e-74
Identities = 135/150 (90%), Positives = 143/150 (95%)
Frame = -2
Query: 643 SIQLLYGLREALDLIFEEGLDNVILRHKRLGHATRLAVEAWGLKNCTQKEEWYSDTVTAV 464
SIQLLYGLR ALDL+FEEGLDNVI RH RLG ATRLAVEAWGLKNCTQKEEW+SDTVTAV
Sbjct: 252 SIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311
Query: 463 LVPPYIDAAEVVRRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILN 284
LVP YID+AE+VRR+WKRYN+SLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEM+L
Sbjct: 312 LVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLK 371
Query: 283 DVGYPVKLGSGVAAASAYFQNNIPMIPSRI 194
DVGYPVKLGSGVAAASAY QNNIP+IPSRI
Sbjct: 372 DVGYPVKLGSGVAAASAYLQNNIPLIPSRI 401
>gb|AAB95218.1| putative serine-glyoxylate aminotransferase [Fritillaria agrestis]
Length = 401
Score = 271 bits (693), Expect = 5e-72
Identities = 130/150 (86%), Positives = 142/150 (94%)
Frame = -2
Query: 643 SIQLLYGLREALDLIFEEGLDNVILRHKRLGHATRLAVEAWGLKNCTQKEEWYSDTVTAV 464
SIQ+LYGLR ALDLIFEEGLDNVI RH RLG ATRLAVEAWGLKNCTQKEEW+SDTVTAV
Sbjct: 252 SIQMLYGLRAALDLIFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWHSDTVTAV 311
Query: 463 LVPPYIDAAEVVRRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILN 284
+VPPYID++E+VRR+WKRYN+SLGLGLNKVAGKVFRIGHLGNLNELQLLGCL+GVEM+L
Sbjct: 312 VVPPYIDSSEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLSGVEMVLK 371
Query: 283 DVGYPVKLGSGVAAASAYFQNNIPMIPSRI 194
DVGYPVKLGSGVAAA+ Y QN+ PMIPSRI
Sbjct: 372 DVGYPVKLGSGVAAAATYLQNSTPMIPSRI 401
>ref|NP_178969.1| alanine-glyoxylate aminotransferase; protein id: At2g13360.1,
supported by cDNA: 8306., supported by cDNA:
gi_12082306, supported by cDNA: gi_20465424, supported
by cDNA: gi_21281088, supported by cDNA: gi_3288820
[Arabidopsis thaliana] gi|25287370|pir||T52250 probable
alanine-glyoxylate transaminase (EC 2.6.1.44) [imported]
- Arabidopsis thaliana gi|3288821|gb|AAC26854.1|
alanine:glyoxylate aminotransferase; transaminase
[Arabidopsis thaliana] gi|4733989|gb|AAD28669.1|
alanine-glyoxylate aminotransferase [Arabidopsis
thaliana] gi|12082307|dbj|BAB20811.1| serine glyoxylate
aminotransferase [Arabidopsis thaliana]
gi|20465425|gb|AAM20136.1| putative alanine-glyoxylate
aminotransferase [Arabidopsis thaliana]
gi|21281089|gb|AAM45058.1| putative alanine-glyoxylate
aminotransferase [Arabidopsis thaliana]
Length = 401
Score = 260 bits (664), Expect = 1e-68
Identities = 125/150 (83%), Positives = 140/150 (93%)
Frame = -2
Query: 643 SIQLLYGLREALDLIFEEGLDNVILRHKRLGHATRLAVEAWGLKNCTQKEEWYSDTVTAV 464
SIQLLYGLR ALDLIFEEGL+N+I RH RLG ATRLAVEAWGLKNCTQKEEW S+TVTAV
Sbjct: 252 SIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQKEEWISNTVTAV 311
Query: 463 LVPPYIDAAEVVRRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILN 284
+VPP+ID +E+VRR+W+RYN+SLGLGLNKVAGKVFRIGHLGN+NELQLLGCLAGVEMIL
Sbjct: 312 MVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGCLAGVEMILK 371
Query: 283 DVGYPVKLGSGVAAASAYFQNNIPMIPSRI 194
DVGYPV +GSGVAAAS Y Q++IP+IPSRI
Sbjct: 372 DVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401
>emb|CAD13310.1| serine-glyoxylate aminotransferase [Methylobacterium
dichloromethanicum]
Length = 379
Score = 176 bits (447), Expect = 2e-43
Identities = 87/141 (61%), Positives = 108/141 (75%)
Frame = -2
Query: 640 IQLLYGLREALDLIFEEGLDNVILRHKRLGHATRLAVEAWGLKNCTQKEEWYSDTVTAVL 461
+ LLYGLREAL +FEEGL+NV RH LG ATR AV AWGLK C + EW SDTVTA+L
Sbjct: 234 LPLLYGLREALACLFEEGLENVYHRHAVLGEATRQAVAAWGLKTCAKSPEWNSDTVTAIL 293
Query: 460 VPPYIDAAEVVRRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILND 281
P +DAA++++ ++ RYN++LG GL++VAGKVFRIGH+G+LNEL LLG +AG EM L D
Sbjct: 294 APEGVDAAKIIKHAYVRYNLALGAGLSQVAGKVFRIGHVGDLNELSLLGAIAGAEMSLID 353
Query: 280 VGYPVKLGSGVAAASAYFQNN 218
G V GSGVAAAS+Y + N
Sbjct: 354 NGVKVTPGSGVAAASSYLREN 374
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 552,904,519
Number of Sequences: 1393205
Number of extensions: 11989372
Number of successful extensions: 31951
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 30607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31864
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
