Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001659A_C01 KMC001659A_c01
(736 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC10212.1| putative mitochondrial glyoxalase II [Cicer arie... 94 2e-18
pir||F86196 hypothetical protein [imported] - Arabidopsis thalia... 83 4e-15
gb|AAM20436.1| glyoxalase II isozyme, putative [Arabidopsis thal... 83 4e-15
ref|NP_563760.1| glyoxalase II, putative (hydroxyacylglutathione... 83 4e-15
ref|NP_180693.1| glyoxalase II, putative (hydroxyacylglutathione... 80 2e-14
>emb|CAC10212.1| putative mitochondrial glyoxalase II [Cicer arietinum]
Length = 271
Score = 94.4 bits (233), Expect = 2e-18
Identities = 44/56 (78%), Positives = 51/56 (90%)
Frame = -3
Query: 731 LRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF 564
LRNKGLPT+PTTLKMEKACNPFLRT S +IRQ LK+AATA+D EAL++IRQA+D F
Sbjct: 216 LRNKGLPTVPTTLKMEKACNPFLRTWSTEIRQKLKVAATAEDAEALSVIRQAEDTF 271
>pir||F86196 hypothetical protein [imported] - Arabidopsis thaliana
gi|8810475|gb|AAF80136.1|AC024174_18 Contains similarity
to glyoxalase II isozyme from Arabidopsis thaliana
gb|U90927 and is a member of the Metallo-beta-lactamase
seperfamily PF|00753. ESTs gb|AV519053, gb|AV535897,
gb|AV535667, gb|AV556046, gb|BE039169, gb|AV525509 come
from this gene
Length = 512
Score = 83.2 bits (204), Expect = 4e-15
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -3
Query: 731 LRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF 564
LR+K LPTIPTT+KMEKACNPFLRT + IR++L I TAD+ EAL IIR+AKDNF
Sbjct: 455 LRDKKLPTIPTTMKMEKACNPFLRTENTDIRRALGIPETADEAEALGIIRRAKDNF 510
>gb|AAM20436.1| glyoxalase II isozyme, putative [Arabidopsis thaliana]
gi|22136310|gb|AAM91233.1| glyoxalase II isozyme,
putative [Arabidopsis thaliana]
Length = 330
Score = 83.2 bits (204), Expect = 4e-15
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -3
Query: 731 LRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF 564
LR+K LPTIPTT+KMEKACNPFLRT + IR++L I TAD+ EAL IIR+AKDNF
Sbjct: 273 LRDKKLPTIPTTMKMEKACNPFLRTENTDIRRALGIPETADEAEALGIIRRAKDNF 328
>ref|NP_563760.1| glyoxalase II, putative (hydroxyacylglutathione hydrolase); protein
id: At1g06130.1, supported by cDNA: 17756. [Arabidopsis
thaliana] gi|21553879|gb|AAM62972.1| glyoxalase II
isozyme, putative [Arabidopsis thaliana]
Length = 331
Score = 83.2 bits (204), Expect = 4e-15
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -3
Query: 731 LRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF 564
LR+K LPTIPTT+KMEKACNPFLRT + IR++L I TAD+ EAL IIR+AKDNF
Sbjct: 274 LRDKKLPTIPTTMKMEKACNPFLRTENTDIRRALGIPETADEAEALGIIRRAKDNF 329
>ref|NP_180693.1| glyoxalase II, putative (hydroxyacylglutathione hydrolase); protein
id: At2g31350.1, supported by cDNA: gi_18176313,
supported by cDNA: gi_20465674 [Arabidopsis thaliana]
gi|25408148|pir||F84719 probable glyoxalase II
[imported] - Arabidopsis thaliana
gi|4589965|gb|AAD26483.1| putative glyoxalase II
[Arabidopsis thaliana] gi|18176314|gb|AAL60021.1|
putative glyoxalase II [Arabidopsis thaliana]
gi|20465675|gb|AAM20306.1| putative glyoxalase II
[Arabidopsis thaliana]
Length = 324
Score = 80.5 bits (197), Expect = 2e-14
Identities = 38/56 (67%), Positives = 48/56 (84%)
Frame = -3
Query: 731 LRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF 564
LR+K LPTIPTT+KMEKACNPFLR+S+ IR++L+I AD+ EAL IIR+AKD+F
Sbjct: 269 LRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADEAEALGIIRKAKDDF 324
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 618,423,223
Number of Sequences: 1393205
Number of extensions: 13210739
Number of successful extensions: 23165
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 22608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23146
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
