Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001652A_C01 KMC001652A_c01
(762 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.19... 88 2e-17
gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arab... 75 7e-13
ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; ... 75 7e-13
gb|AAD53967.1| aldehyde reductase [Vigna radiata] 75 7e-13
pir||T11610 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.19... 75 1e-12
>pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - apple tree
gi|2981475|gb|AAC06319.1| putative cinnamyl alcohol
dehydrogenase [Malus x domestica]
Length = 325
Score = 88.2 bits (217), Expect(2) = 2e-17
Identities = 39/46 (84%), Positives = 46/46 (99%)
Frame = -2
Query: 761 ILRELYPTLQLPEKCADDKPYVPTYQVSQDKAKSLGIEFVPLEMSL 624
ILRELYPTLQLPEKCADDKP+VPTYQVS++KAKSLG+EF+PL++SL
Sbjct: 265 ILRELYPTLQLPEKCADDKPFVPTYQVSKEKAKSLGVEFIPLDVSL 310
Score = 23.1 bits (48), Expect(2) = 2e-17
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 612 VESLKEKKFTNF 577
VESLKEK F NF
Sbjct: 314 VESLKEKGFVNF 325
>gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arabidopsis thaliana]
Length = 326
Score = 75.1 bits (183), Expect(2) = 7e-13
Identities = 31/46 (67%), Positives = 41/46 (88%)
Frame = -2
Query: 761 ILRELYPTLQLPEKCADDKPYVPTYQVSQDKAKSLGIEFVPLEMSL 624
ILRELYP L LPE+C D+ PYVPTYQVS+DK +SLGI+++PL++S+
Sbjct: 266 ILRELYPNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSI 311
Score = 20.8 bits (42), Expect(2) = 7e-13
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 612 VESLKEKKFTNF 577
VESLKEK F F
Sbjct: 315 VESLKEKGFAQF 326
>ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; protein id:
At5g19440.1, supported by cDNA: 6748. [Arabidopsis
thaliana]
Length = 326
Score = 75.1 bits (183), Expect(2) = 7e-13
Identities = 31/46 (67%), Positives = 41/46 (88%)
Frame = -2
Query: 761 ILRELYPTLQLPEKCADDKPYVPTYQVSQDKAKSLGIEFVPLEMSL 624
ILRELYP L LPE+C D+ PYVPTYQVS+DK +SLGI+++PL++S+
Sbjct: 266 ILRELYPNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSI 311
Score = 20.8 bits (42), Expect(2) = 7e-13
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 612 VESLKEKKFTNF 577
VESLKEK F F
Sbjct: 315 VESLKEKGFAQF 326
>gb|AAD53967.1| aldehyde reductase [Vigna radiata]
Length = 325
Score = 74.7 bits (182), Expect(2) = 7e-13
Identities = 32/46 (69%), Positives = 42/46 (90%)
Frame = -2
Query: 761 ILRELYPTLQLPEKCADDKPYVPTYQVSQDKAKSLGIEFVPLEMSL 624
ILR+LYPTLQ+P+KC DDKP P +QVS++KAKSLGI+++PLE+SL
Sbjct: 265 ILRDLYPTLQIPDKCEDDKPLEPIFQVSKEKAKSLGIDYIPLEVSL 310
Score = 21.2 bits (43), Expect(2) = 7e-13
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 612 VESLKEKKF 586
VESLKEKKF
Sbjct: 314 VESLKEKKF 322
>pir||T11610 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) CPRD14 -
cowpea gi|1854445|dbj|BAA12161.1| CPRD14 protein [Vigna
unguiculata]
Length = 325
Score = 75.1 bits (183), Expect = 1e-12
Identities = 32/46 (69%), Positives = 41/46 (88%)
Frame = -2
Query: 761 ILRELYPTLQLPEKCADDKPYVPTYQVSQDKAKSLGIEFVPLEMSL 624
IL +LYPTLQLP+KC DD+PY P +QVS++KAKSLG+EF PLE+S+
Sbjct: 265 ILHDLYPTLQLPQKCVDDRPYDPIFQVSKEKAKSLGLEFTPLEVSI 310
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 679,961,184
Number of Sequences: 1393205
Number of extensions: 15589057
Number of successful extensions: 35648
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 34284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35617
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 36974710344
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
