Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001644A_C01 KMC001644A_c01
(650 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM63236.1| putative mitochondrial dicarboxylate carrier prot... 222 4e-57
gb|AAK44155.1|AF370340_1 putative mitochondrial dicarboxylate ca... 221 7e-57
ref|NP_179836.1| mitochondrial carrier protein family; protein i... 221 7e-57
ref|NP_194188.1| mitochondrial carrier protein family; protein i... 213 1e-54
ref|NP_196509.1| mitochondrial carrier protein family; protein i... 177 1e-43
>gb|AAM63236.1| putative mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 222 bits (565), Expect = 4e-57
Identities = 109/137 (79%), Positives = 124/137 (89%)
Frame = -3
Query: 642 EGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETIVGKGWMNDGIGTHVAASFAAGFVAA 463
EG+ SLWRGS LT+NRAM+VT+SQLASYD KETI+ KG + DG+GTHV ASFAAGFVA+
Sbjct: 175 EGVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVLASFAAGFVAS 234
Query: 462 VASNPVDVIKTRVMNMKVDAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGPFT 283
VASNPVDVIKTRVMNMKV AG APPY GA+DCALKTVKAEG ++LYKGFIPT+SRQ PFT
Sbjct: 235 VASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFT 294
Query: 282 VVLFVTLEQVRKLLKEF 232
VVLFVTLEQV+KLLK++
Sbjct: 295 VVLFVTLEQVKKLLKDY 311
>gb|AAK44155.1|AF370340_1 putative mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 221 bits (563), Expect = 7e-57
Identities = 108/137 (78%), Positives = 124/137 (89%)
Frame = -3
Query: 642 EGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETIVGKGWMNDGIGTHVAASFAAGFVAA 463
EG+ SLWRGS LT+NRAM+VT+SQLASYD KETI+ KG + DG+GTHV+ASFAAGFVA+
Sbjct: 175 EGVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVSASFAAGFVAS 234
Query: 462 VASNPVDVIKTRVMNMKVDAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGPFT 283
VASNPVDVIKTRVMNMKV AG APPY GA+DCALKTVKAEG ++LYKGFIPT+SRQ PFT
Sbjct: 235 VASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFT 294
Query: 282 VVLFVTLEQVRKLLKEF 232
VVLFVTLEQV+KL K++
Sbjct: 295 VVLFVTLEQVKKLFKDY 311
>ref|NP_179836.1| mitochondrial carrier protein family; protein id: At2g22500.1,
supported by cDNA: 20723., supported by cDNA:
gi_13877658, supported by cDNA: gi_13878154 [Arabidopsis
thaliana] gi|25295876|pir||D84613 hypothetical protein
At2g22500 [imported] - Arabidopsis thaliana
gi|4544443|gb|AAD22351.1| putative mitochondrial
dicarboxylate carrier protein [Arabidopsis thaliana]
gi|13877659|gb|AAK43907.1|AF370588_1 putative
mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana] gi|23297154|gb|AAN13106.1| putative
mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 221 bits (563), Expect = 7e-57
Identities = 108/137 (78%), Positives = 124/137 (89%)
Frame = -3
Query: 642 EGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETIVGKGWMNDGIGTHVAASFAAGFVAA 463
EG+ SLWRGS LT+NRAM+VT+SQLASYD KETI+ KG + DG+GTHV+ASFAAGFVA+
Sbjct: 175 EGVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVSASFAAGFVAS 234
Query: 462 VASNPVDVIKTRVMNMKVDAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGPFT 283
VASNPVDVIKTRVMNMKV AG APPY GA+DCALKTVKAEG ++LYKGFIPT+SRQ PFT
Sbjct: 235 VASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFT 294
Query: 282 VVLFVTLEQVRKLLKEF 232
VVLFVTLEQV+KL K++
Sbjct: 295 VVLFVTLEQVKKLFKDY 311
>ref|NP_194188.1| mitochondrial carrier protein family; protein id: At4g24570.1,
supported by cDNA: 119476., supported by cDNA:
gi_14596142 [Arabidopsis thaliana]
gi|7488415|pir||T05577 uncoupling protein homolog
F22K18.230 - Arabidopsis thaliana
gi|4220533|emb|CAA23006.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|7269307|emb|CAB79367.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|14596143|gb|AAK68799.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|21537077|gb|AAM61418.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
Length = 313
Score = 213 bits (543), Expect = 1e-54
Identities = 108/137 (78%), Positives = 121/137 (87%)
Frame = -3
Query: 642 EGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETIVGKGWMNDGIGTHVAASFAAGFVAA 463
EG+ SLWRGS LT+NRAMIVTA+QLASYDQFKE I+ G MNDG+GTHV ASFAAGFVA+
Sbjct: 182 EGVTSLWRGSALTINRAMIVTAAQLASYDQFKEGILENGVMNDGLGTHVVASFAAGFVAS 241
Query: 462 VASNPVDVIKTRVMNMKVDAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGPFT 283
VASNPVDVIKTRVMNMKV A Y+GA DCA+KTVKAEG +ALYKGF+PT+ RQGPFT
Sbjct: 242 VASNPVDVIKTRVMNMKVGA-----YDGAWDCAVKTVKAEGAMALYKGFVPTVCRQGPFT 296
Query: 282 VVLFVTLEQVRKLLKEF 232
VVLFVTLEQVRKLL++F
Sbjct: 297 VVLFVTLEQVRKLLRDF 313
>ref|NP_196509.1| mitochondrial carrier protein family; protein id: At5g09470.1
[Arabidopsis thaliana] gi|9955534|emb|CAC05473.1|
mitochondrial carrier-like protein [Arabidopsis
thaliana]
Length = 337
Score = 177 bits (448), Expect = 1e-43
Identities = 92/138 (66%), Positives = 108/138 (77%), Gaps = 1/138 (0%)
Frame = -3
Query: 645 EEGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETIVGKG-WMNDGIGTHVAASFAAGFV 469
+EG+ SLWRGS LTVNRAMIVTASQLA+YD KE +V G GIGTHVAASFAAG V
Sbjct: 202 QEGVSSLWRGSWLTVNRAMIVTASQLATYDHVKEILVAGGRGTPGGIGTHVAASFAAGIV 261
Query: 468 AAVASNPVDVIKTRVMNMKVDAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGP 289
AAVASNP+DV+KTR+MN + Y G LDCA+K V EGP+ALYKG +PT +RQGP
Sbjct: 262 AAVASNPIDVVKTRMMNADKEI-----YGGPLDCAVKMVAEEGPMALYKGLVPTATRQGP 316
Query: 288 FTVVLFVTLEQVRKLLKE 235
FT++LF+TLEQVR LLK+
Sbjct: 317 FTMILFLTLEQVRGLLKD 334
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 609,109,275
Number of Sequences: 1393205
Number of extensions: 15931321
Number of successful extensions: 119087
Number of sequences better than 10.0: 1742
Number of HSP's better than 10.0 without gapping: 61878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93230
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
