Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001627A_C01 KMC001627A_c01
(645 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O24011|VATL_LYCES Vacuolar ATP synthase 16 kDa proteolipid su... 92 8e-18
ref|NP_179244.1| putative vacuolar proton-ATPase 16 kDa proteoli... 92 8e-18
gb|AAA99934.1| vacuolar H+-pumping ATPase 16 kDa proteolipid 92 8e-18
sp|Q40585|VATL_TOBAC Vacuolar ATP synthase 16 kDa proteolipid su... 92 8e-18
sp|Q43434|VATL_GOSHI Vacuolar ATP synthase 16 kDa proteolipid su... 92 8e-18
>sp|O24011|VATL_LYCES Vacuolar ATP synthase 16 kDa proteolipid subunit
gi|2282062|gb|AAB64199.1| vacuolar proton ATPase
proteolipid subunit [Lycopersicon esculentum]
Length = 164
Score = 91.7 bits (226), Expect = 8e-18
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 644 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGPSRAE 498
GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAG SRAE
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>ref|NP_179244.1| putative vacuolar proton-ATPase 16 kDa proteolipid; protein id:
At2g16510.1 [Arabidopsis thaliana]
gi|15234868|ref|NP_195603.1| H+-transporting ATPase 16K
chain P2, vacuolar; protein id: At4g38920.1, supported
by cDNA: 31833., supported by cDNA: gi_15146215,
supported by cDNA: gi_15724313, supported by cDNA:
gi_16648932, supported by cDNA: gi_19699131, supported
by cDNA: gi_20259801 [Arabidopsis thaliana]
gi|15236183|ref|NP_195198.1| vacuolar H+-transporting
ATPase 16K chain; protein id: At4g34720.1, supported by
cDNA: 24998., supported by cDNA: gi_13926223, supported
by cDNA: gi_926928 [Arabidopsis thaliana]
gi|27923952|sp|P59227|VTL1_ARATH Vacuolar ATP synthase
16 kDa proteolipid subunit 1/3/5 (V-ATPase 16 kDa
proteolipid subunit 1/3/5) gi|7436329|pir||S60130
H+-exporting ATPase (EC 3.6.3.6) 16K chain P1/P3,
vacuolar - Arabidopsis thaliana gi|926929|gb|AAA99933.1|
vacuolar H+-pumping ATPase 16 kDa proteolipid
gi|926933|gb|AAA99935.1| vacuolar H+-pumping ATPase 16
kDa proteolipid gi|3096941|emb|CAA18851.1| vacuolar
H+-transporting ATPase 16K chain [Arabidopsis thaliana]
gi|4539311|emb|CAB38812.1| H+-transporting ATPase 16K
chain P2, vacuolar [Arabidopsis thaliana]
gi|4589976|gb|AAD26493.1| putative vacuolar
proton-ATPase 16 kDa proteolipid [Arabidopsis thaliana]
gi|7270423|emb|CAB80189.1| vacuolar H+-transporting
ATPase 16K chain [Arabidopsis thaliana]
gi|7270875|emb|CAB80555.1| H+-transporting ATPase 16K
chain P2, vacuolar [Arabidopsis thaliana]
gi|13926224|gb|AAK49588.1|AF372872_1 AT4g34720/T4L20_300
[Arabidopsis thaliana] gi|15146216|gb|AAK83591.1|
AT4g38920/F19H22_20 [Arabidopsis thaliana]
gi|15724314|gb|AAL06550.1|AF412097_1 AT4g38920/F19H22_20
[Arabidopsis thaliana] gi|16648933|gb|AAL24318.1|
H+-transporting ATPase 16K chain P2, vacuolar
[Arabidopsis thaliana] gi|19699132|gb|AAL90932.1|
AT4g38920/F19H22_20 [Arabidopsis thaliana]
gi|20259802|gb|AAM13248.1| H+-transporting ATPase 16K
chain P2, vacuolar [Arabidopsis thaliana]
gi|21554307|gb|AAM63410.1| vacuolar H+-transporting
ATPase 16K chain [Arabidopsis thaliana]
gi|21592721|gb|AAM64670.1| vacuolar H+-transporting
ATPase 16K chain [Arabidopsis thaliana]
gi|22135785|gb|AAM91049.1| AT4g34720/T4L20_300
[Arabidopsis thaliana]
Length = 164
Score = 91.7 bits (226), Expect = 8e-18
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 644 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGPSRAE 498
GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAG SRAE
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>gb|AAA99934.1| vacuolar H+-pumping ATPase 16 kDa proteolipid
Length = 157
Score = 91.7 bits (226), Expect = 8e-18
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 644 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGPSRAE 498
GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAG SRAE
Sbjct: 109 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 157
>sp|Q40585|VATL_TOBAC Vacuolar ATP synthase 16 kDa proteolipid subunit
gi|1200118|emb|CAA65062.1| c subunit of V-type ATPase
[Nicotiana tabacum]
Length = 165
Score = 91.7 bits (226), Expect = 8e-18
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 644 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGPSRAE 498
GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAG SRAE
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
>sp|Q43434|VATL_GOSHI Vacuolar ATP synthase 16 kDa proteolipid subunit
gi|755148|gb|AAA82976.1| vacuolar H+-ATPase proteolipid
(16 kDa) subunit gi|4519415|dbj|BAA75542.1| vacuolar
H+-ATPase c subunit [Citrus unshiu]
gi|6721529|dbj|BAA89595.1| vacuolar H+-ATPase c subunit
[Citrus unshiu]
Length = 165
Score = 91.7 bits (226), Expect = 8e-18
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 644 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGPSRAE 498
GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAG SRAE
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,986,861
Number of Sequences: 1393205
Number of extensions: 11761143
Number of successful extensions: 27822
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 26909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27813
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
