KMC001623A_c03
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC001623A_C03 KMC001623A_c03
ggagaaggaaaacatgtaaattcattagacagtagtgcaCTCAAACAAAATATGAACGAT
AGAAGTATAGAACAGTAGTCTTTAAATACTTTAACCAAAAGGGTGCTAACAAACTATACG
GATTAAAATAAGCTCAAGACATGAAAGAACCAACTAAAATCAAGTCTGTAAAACTATGAT
TTCTTAAATATAAATCCCCACAGTGCTGTGAAAAACCTCAACCACAATTCTTCATCCAAA
CTTATTCAATGCAAATAACCAACATAACGGTGCCACATATTTCTTCATCCAAACTTATCG
TCATTATCTGTATATCTTAGCCTCCACCACCAGAACCATATTTCTTTCCGAACACGATGA
GCTGTAGCTTATCATAACCAGCAAGCACCCCAGCACCTGCAACAGCACGCAGTATGTTCG
CACCAGCACCTTTGAAGAGCGACTTAGTACCCTCTTTTGCAATGATAACTTTGAACGCAT
CCAGAGAGCTCTTGTATTTTACAGCTTCTCCAGATGTCATCATCATCCTTCTACGCACTG
TATCAATGGGGTAAGAGGCCAAGCCAGCACCTATTGTGATCCCCCATCCCAAAAGGAAAC
TAGCAAAGAAACTATCCTGCATGTCACCAACCAAAACCACTGGTTTCAGAGAATCATACA
TTCCAAAGTATAGACCACGATAAACTATAATTCCAATACATGAGATGCTGAATCCACGAT
AAAGGCCAGCAATACCATCACTCTGAATGGTTTTCTTGTACACATCAACCAAGCCATTGA
ACTGCCTCTCACCACCCTTCTTTGCAGACTTTGAATCATTGGCTAAACGTGTACGGGCAT
AGTCCAAAGAATAGACAAATAAGAGGGAGGAAGCACCAGCAGCCCCACCAGATGCCAAAT
TCCCAGCAAACCACTTCCAGTAGCCATCTTTGTCTTTTTTAAAATTGAAAAGCCTCTTGA
AGTAATCCTTAAAAGCAAAGTTTAGAGCCTGAGTAGGGAAGTATCTGATAACATTAGCAG
TATTTCCTCTCCAAAGAGCAATCGCTCCTTCATCCTTAGTAGTTCGAGCAAAACAATCAC
CAATTCCCTTGTAAGGTTCAGACAATCGTCCGCTCTTGATCATTTCATCCTGGTTTTGAA
TGAGTAACTTAATTCGTTCAATTGGAGCTGCAGCCGTCTTAGACACAGCAGCTGAAACTC
CACCCATGAGAAAATCCACCAAAAATGCAGATGCCCCTTTCTCAGCTGGAGCAGGCACAA
ACACTGGAGCCAAACTTGCAGACGGCACAACTCCATTGAAGTGAGTACTAGTTGTGGAAT
AGTTTCTGGATTGATTAGGGGAGAGCCTGGACACAAGATAAGAATGTCCAGCTAACTTCT
GGGCTACCGATGGATGCTGTGAATGGAATCCATCAGTCATCATTGCACCTTAAGGTTACC
CGAAAGGGGCGTCGCGTCGGGGGGGCc


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001623A_C03 KMC001623A_c03
         (1467 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_194568.1| mitochondrial ADP,ATP carrier protein, putative...   595  e-169
gb|AAM65696.1| ADP,ATP carrier-like protein [Arabidopsis thaliana]    589  e-167
sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial pr...   568  e-161
emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus]       566  e-160
sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial precu...   565  e-160

>ref|NP_194568.1| mitochondrial ADP,ATP carrier protein, putative; protein id:
            At4g28390.1, supported by cDNA: 42036. [Arabidopsis
            thaliana] gi|7441721|pir||T04608 ADP,ATP carrier protein
            F20O9.60 - Arabidopsis thaliana
            gi|2842480|emb|CAA16877.1| ADP, ATP carrier-like protein
            [Arabidopsis thaliana] gi|7269693|emb|CAB79641.1| ADP,
            ATP carrier-like protein [Arabidopsis thaliana]
            gi|26451091|dbj|BAC42650.1| putative ADP,ATP carrier
            [Arabidopsis thaliana]
          Length = 379

 Score =  595 bits (1533), Expect = e-169
 Identities = 300/377 (79%), Positives = 326/377 (85%), Gaps = 17/377 (4%)
 Frame = -3

Query: 1402 SQHPSVAQKLAGHSYLVSRLSPN-QSRNYSTTSTHFNG----------------VVPSAS 1274
            S+HPSV QKL G SYL++RLSP+ Q+R Y  +  + NG                ++P  S
Sbjct: 4    SKHPSVFQKLHGQSYLINRLSPSVQARGYCVSGAYVNGGLQSLLQPTSHGVGSSLIPHGS 63

Query: 1273 LAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSEP 1094
              PV   AP+EK  + FL+DFLMGGVSAAVSKTAAAPIER+KLLIQNQDEMIK+GRLSEP
Sbjct: 64   F-PVLAHAPSEKTGTGFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEP 122

Query: 1093 YKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWK 914
            YKGI DCFART KDEG +ALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK+KDGYWK
Sbjct: 123  YKGISDCFARTVKDEGMLALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKEKDGYWK 182

Query: 913  WFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYKKTIQSDG 734
            WFAGNLASGGAAGASSLLFVYSLDYARTRLAND+K+AKKGG+RQFNG+VDVYKKTI SDG
Sbjct: 183  WFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGQRQFNGMVDVYKKTIASDG 242

Query: 733  IAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWGITIGAGLAS 554
            I GLYRGF+ISC+GI+VYRGLYFG+YDSLKPVVLV  +QDSF ASFLLGWGITIGAGLAS
Sbjct: 243  IVGLYRGFNISCVGIVVYRGLYFGLYDSLKPVVLVDGLQDSFLASFLLGWGITIGAGLAS 302

Query: 553  YPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAVAGAGVLAGY 374
            YPIDTVRRRMMMTSGEAVKYKSSL AF  I+  EG KSLFKGAGANILRAVAGAGVLAGY
Sbjct: 303  YPIDTVRRRMMMTSGEAVKYKSSLQAFSQIVKNEGAKSLFKGAGANILRAVAGAGVLAGY 362

Query: 373  DKLQLIVFGKKYGSGGG 323
            DKLQLIV GKKYGSGGG
Sbjct: 363  DKLQLIVLGKKYGSGGG 379

>gb|AAM65696.1| ADP,ATP carrier-like protein [Arabidopsis thaliana]
          Length = 379

 Score =  589 bits (1518), Expect = e-167
 Identities = 298/377 (79%), Positives = 324/377 (85%), Gaps = 17/377 (4%)
 Frame = -3

Query: 1402 SQHPSVAQKLAGHSYLVSRLSPN-QSRNYSTTSTHFNG----------------VVPSAS 1274
            S+HPSV QKL G SYL++RLSP+ Q+R Y  +  + NG                ++P  S
Sbjct: 4    SKHPSVFQKLHGQSYLINRLSPSVQARGYCVSGAYVNGGLQSLLQPTSHGVGSSLIPHGS 63

Query: 1273 LAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSEP 1094
              PV   AP+EK  + FL+ FLMGGVSAAVSKTAAAPIER+KLLIQNQDEMIK+GRLSEP
Sbjct: 64   F-PVLAHAPSEKTGTGFLIYFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEP 122

Query: 1093 YKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWK 914
            YKGI DCFART KDEG +ALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK+KDGYWK
Sbjct: 123  YKGISDCFARTVKDEGMLALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKEKDGYWK 182

Query: 913  WFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYKKTIQSDG 734
            WFAGNLASGGAAGASSLLFVYSLDYARTRLAND+K+AKKGG+RQFNG+VDVYKKTI SDG
Sbjct: 183  WFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGQRQFNGMVDVYKKTIASDG 242

Query: 733  IAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWGITIGAGLAS 554
            I GLYRGF+ISC+GI+VYRGLYFG+YDSLKPVVLV  +QDSF ASFLLGWGITIGAGLAS
Sbjct: 243  IVGLYRGFNISCVGIVVYRGLYFGLYDSLKPVVLVDGLQDSFLASFLLGWGITIGAGLAS 302

Query: 553  YPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAVAGAGVLAGY 374
            YPIDTVRR MMMTSGEAVKYKSSL AF  I+  EG KSLFKGAGANILRAVAGAGVLAGY
Sbjct: 303  YPIDTVRRXMMMTSGEAVKYKSSLQAFSQIVKNEGAKSLFKGAGANILRAVAGAGVLAGY 362

Query: 373  DKLQLIVFGKKYGSGGG 323
            DKLQLIV GKKYGSGGG
Sbjct: 363  DKLQLIVLGKKYGSGGG 379

>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
            translocase 1) (Adenine nucleotide translocator 1) (ANT
            1) gi|7441722|pir||T09709 ADP,ATP carrier protein CANT1 -
            upland cotton gi|2463664|gb|AAB72047.1| adenine
            nucleotide translocator 1 [Gossypium hirsutum]
          Length = 386

 Score =  568 bits (1465), Expect = e-161
 Identities = 294/382 (76%), Positives = 319/382 (82%), Gaps = 24/382 (6%)
 Frame = -3

Query: 1399 QHPSVAQKLAGHSYLVSRLSPNQSRN--------YSTTSTHFN----------------G 1292
            QHPSV QK+AG  +  S     Q  N        Y   + + N                 
Sbjct: 5    QHPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPVRAFGDLS 64

Query: 1291 VVPSASLAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKS 1112
            +VPS + A + V APAEKG S+F +DFLMGGVSAAVSKTAAAPIER+KLLIQNQDEMIKS
Sbjct: 65   MVPSTASA-ICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKS 123

Query: 1111 GRLSEPYKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD 932
            GRLSEPYKGIGDCF RT KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD
Sbjct: 124  GRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD 183

Query: 931  KDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYKK 752
            +DGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLAND+K+AKKGGERQFNGLVDVY+K
Sbjct: 184  RDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRK 243

Query: 751  TIQSDGIAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWGITI 572
            T++SDGIAGLYRGF+ISC+GIIVYRGLYFGMYDSLKPV+L G MQDSFFASF+LGW IT 
Sbjct: 244  TLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLGWLITN 303

Query: 571  GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAVAGA 392
            GA LASYPIDTVRRRMMMTSG+AVKYKSSLDAF  I+  EG KSLFKGAG+NILRA+AGA
Sbjct: 304  GAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGA 363

Query: 391  GVLAGYDKLQLIVFGKKYGSGG 326
            GVLAGYDKLQLIVFGKKYGSGG
Sbjct: 364  GVLAGYDKLQLIVFGKKYGSGG 385

>emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus]
          Length = 388

 Score =  566 bits (1458), Expect = e-160
 Identities = 295/385 (76%), Positives = 321/385 (82%), Gaps = 27/385 (7%)
 Frame = -3

Query: 1399 QHPSVAQKLAGHSYLVSRLSPN--------------QSR---NYSTTSTHFNGVVPS--- 1280
            Q P++ +K++   +L S +S +              Q R   NYS  +  +  V+PS   
Sbjct: 6    QRPTIMEKVSSQLHLRSGVSSDIQSYDAAFRRPAVYQRRSFGNYSNAALQYP-VMPSCRA 64

Query: 1279 -------ASLAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEM 1121
                   A+ +PVF  APAEKG   FL+DFLMGGVSAAVSKTAAAPIER+KLLIQNQDEM
Sbjct: 65   TTDLSSVATASPVFAAAPAEKGH--FLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM 122

Query: 1120 IKSGRLSEPYKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 941
            IKSGRLSEPYKGIGDCF RT  DEG +ALWRGNTANVIRYFPTQALNFAFKDYFKRLFNF
Sbjct: 123  IKSGRLSEPYKGIGDCFKRTMADEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 182

Query: 940  KKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDV 761
            KKD+DGYWKWFAGNLASGGAAGASSL FVYSLDYARTRLANDSK+AKKGGERQFNGLVDV
Sbjct: 183  KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDSKAAKKGGERQFNGLVDV 242

Query: 760  YKKTIQSDGIAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWG 581
            YKKT+ SDG+AGLYRGF+ISC+GIIVYRGLYFGMYDSLKPV+L G +QDSFFASF LGW 
Sbjct: 243  YKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWL 302

Query: 580  ITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAV 401
            IT GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF  I+  EG KSLFKGAGANILRAV
Sbjct: 303  ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAV 362

Query: 400  AGAGVLAGYDKLQLIVFGKKYGSGG 326
            AGAGVLAGYDKLQ+IVFGKKYGSGG
Sbjct: 363  AGAGVLAGYDKLQVIVFGKKYGSGG 387

>sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
            translocase) (Adenine nucleotide translocator) (ANT)
            gi|218145|dbj|BAA02161.1| ATP/ADP translocator [Oryza
            sativa (japonica cultivar-group)]
          Length = 382

 Score =  565 bits (1455), Expect = e-160
 Identities = 284/377 (75%), Positives = 313/377 (82%), Gaps = 18/377 (4%)
 Frame = -3

Query: 1402 SQHPSVAQKLAGHSYLVSRLSPN-----------------QSRNYSTTSTHFNGV-VPSA 1277
            +  P+V QK  G  +L S  S                    +R+Y T      G+ VP  
Sbjct: 5    ANQPTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMM 64

Query: 1276 SLAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSE 1097
            S +P+F  APAEKG   F++DFLMGGVSAAVSKTAAAPIER+KLLIQNQDEMIK+GRLSE
Sbjct: 65   SSSPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSE 124

Query: 1096 PYKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYW 917
            PYKGIGDCF RT KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYW
Sbjct: 125  PYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYW 184

Query: 916  KWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYKKTIQSD 737
            KWF GNLASGGAAGASSL FVYSLDYARTRLAND+K+AK GGERQFNGLVDVY+KT++SD
Sbjct: 185  KWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSD 244

Query: 736  GIAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWGITIGAGLA 557
            GIAGLYRGF+ISC+GIIVYRGLYFGMYDSLKPVVL G +QD+FFASF LGW IT GAGLA
Sbjct: 245  GIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLA 304

Query: 556  SYPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAVAGAGVLAG 377
            SYPIDTVRRRMMMTSGEAVKYKSS+DAF  I+  EG KSLFKGAGANILRA+AGAGVL+G
Sbjct: 305  SYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSG 364

Query: 376  YDKLQLIVFGKKYGSGG 326
            YD+LQ++ FGKKYGSGG
Sbjct: 365  YDQLQILFFGKKYGSGG 381

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,312,206,688
Number of Sequences: 1393205
Number of extensions: 31703328
Number of successful extensions: 116729
Number of sequences better than 10.0: 886
Number of HSP's better than 10.0 without gapping: 94865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113519
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 98102548532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MR021c05_f BP077585 1 385
2 SPD060c10_f BP048761 35 551
3 SPD088e04_f BP051036 36 462
4 SPD054h07_f BP048343 48 544
5 MPD078c01_f AV775106 51 484
6 MF075d07_f BP032276 52 430
7 GENf007a07 BP058610 54 202
8 MPD062b07_f AV774120 56 534
9 GNf029b07 BP069443 62 615
10 MF089d06_f BP032970 62 614
11 MF083a12_f BP032661 63 626
12 MF014a04_f BP028955 64 531
13 MF002h02_f BP028359 65 605
14 GENf014h01 BP058951 67 525
15 MF062c03_f BP031574 67 553
16 MFB096c04_f BP040984 67 559
17 MF086g05_f BP032837 67 546
18 MFB085d09_f BP040209 67 567
19 MF012c06_f BP028856 67 585
20 SPD075a02_f BP049953 67 587
21 MF022b09_f BP029412 67 525
22 MF067c04_f BP031862 67 523
23 GENf028d08 BP059534 67 539
24 MF025g09_f BP029602 67 470
25 MFBL050c07_f BP043809 67 572
26 MR061h05_f BP080703 67 456
27 MR021h08_f BP077633 67 455
28 MF069d10_f BP031966 67 447
29 MFB080c06_f BP039839 67 648
30 MF043c03_f BP030543 67 539
31 MFB027e03_f BP035967 67 652
32 GENf039b01 BP060011 67 417
33 MF047e09_f BP030777 67 536
34 SPD075e09_f BP050004 67 211
35 GENf063a03 BP061019 67 323
36 SPD058d08_f BP048613 67 247
37 GENf072h07 BP061455 69 429
38 GNf078g01 BP073153 70 471
39 MFB057a11_f BP038103 70 528
40 MF091c09_f BP033062 73 570
41 MF046d03_f BP030718 76 441
42 MFB061b03_f BP038407 78 365
43 MF057e04_f BP031300 80 626
44 MWM165f08_f AV767293 567 1132
45 MPD044b10_f AV772973 875 1481
46 MFB082h10_f BP040035 932 1478
47 MR064h02_f BP080945 993 1468
48 MFB036e11_f BP036646 1098 1470




Lotus japonicus
Kazusa DNA Research Institute