Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001608A_C01 KMC001608A_c01
(630 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA10287.2| glucan-endo-1,3-beta-glucosidase [Cicer arietinum] 242 3e-63
gb|AAB24398.1| beta-1,3-glucanase [Pisum sativum] 223 2e-57
sp|Q03467|E13B_PEA Glucan endo-1,3-beta-glucosidase precursor ((... 223 2e-57
pir||S13323 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) pre... 220 1e-56
sp|P23535|E13B_PHAVU Glucan endo-1,3-beta-glucosidase, basic iso... 220 1e-56
>emb|CAA10287.2| glucan-endo-1,3-beta-glucosidase [Cicer arietinum]
Length = 372
Score = 242 bits (617), Expect = 3e-63
Identities = 120/143 (83%), Positives = 131/143 (90%), Gaps = 1/143 (0%)
Frame = -2
Query: 629 SPNIVAQDGQYGYQNLFDAMLDAVHAAIDNTKIGYVEVVVSESGWPSDGGSATSYDNARI 450
SPN++ QDGQYGYQNLFDAMLD+VHAA+DNT IG+V VVVSESGWPSDGGSATSYDNARI
Sbjct: 232 SPNVMVQDGQYGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGSATSYDNARI 291
Query: 449 YLDNLIRHVGRGTPRRPNKPTETYIFAMFDENQKSPEYEKHFGLFSANKQKKYPFGFGGE 270
YLDNLIRHVG+GTPRRP TETYIFAMFDENQKSPE EKHFG+F+ NKQKKYPFGFGGE
Sbjct: 292 YLDNLIRHVGKGTPRRP-WATETYIFAMFDENQKSPELEKHFGVFNPNKQKKYPFGFGGE 350
Query: 269 RRWG-VLGDEFNATSTVSLKSDM 204
RR G ++ D+FNAT TVSLKSDM
Sbjct: 351 RRNGEIVNDDFNAT-TVSLKSDM 372
>gb|AAB24398.1| beta-1,3-glucanase [Pisum sativum]
Length = 339
Score = 223 bits (567), Expect = 2e-57
Identities = 112/143 (78%), Positives = 123/143 (85%), Gaps = 1/143 (0%)
Frame = -2
Query: 629 SPNIVAQDGQYGYQNLFDAMLDAVHAAIDNTKIGYVEVVVSESGWPSDGGSATSYDNARI 450
SP ++ QDG GYQNLFDAMLD+VHAA+DNT IG+V VVVSESGWPSDGGSATSYDNARI
Sbjct: 200 SPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGSATSYDNARI 259
Query: 449 YLDNLIRHVGRGTPRRPNKPTETYIFAMFDENQKSPEYEKHFGLFSANKQKKYPFGFGGE 270
YLDNLIRHVG+GTPRRP TE Y+FAMFDENQKSPE EKHFG+F NKQKKYPFGFGGE
Sbjct: 260 YLDNLIRHVGKGTPRRP-WATEAYLFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGE 318
Query: 269 RRWG-VLGDEFNATSTVSLKSDM 204
RR G ++ +FN TVSLKSDM
Sbjct: 319 RRDGEIVEGDFN--GTVSLKSDM 339
>sp|Q03467|E13B_PEA Glucan endo-1,3-beta-glucosidase precursor ((1->3)-beta-glucan
endohydrolase) ((1->3)-beta-glucanase)
(Beta-1,3-endoglucanase) gi|7447976|pir||T06552 glucan
endo-1,3-beta-D-glucosidase (EC 3.2.1.39) - garden pea
gi|169047|gb|AAA33648.1| beta-1,3-glucanase
Length = 370
Score = 223 bits (567), Expect = 2e-57
Identities = 112/143 (78%), Positives = 123/143 (85%), Gaps = 1/143 (0%)
Frame = -2
Query: 629 SPNIVAQDGQYGYQNLFDAMLDAVHAAIDNTKIGYVEVVVSESGWPSDGGSATSYDNARI 450
SP ++ QDG GYQNLFDAMLD+VHAA+DNT IG+V VVVSESGWPSDGGSATSYDNARI
Sbjct: 231 SPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGSATSYDNARI 290
Query: 449 YLDNLIRHVGRGTPRRPNKPTETYIFAMFDENQKSPEYEKHFGLFSANKQKKYPFGFGGE 270
YLDNLIRHVG+GTPRRP TE Y+FAMFDENQKSPE EKHFG+F NKQKKYPFGFGGE
Sbjct: 291 YLDNLIRHVGKGTPRRP-WATEAYLFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGE 349
Query: 269 RRWG-VLGDEFNATSTVSLKSDM 204
RR G ++ +FN TVSLKSDM
Sbjct: 350 RRDGEIVEGDFN--GTVSLKSDM 370
>pir||S13323 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) precursor - kidney
bean (fragment)
Length = 348
Score = 220 bits (560), Expect = 1e-56
Identities = 99/121 (81%), Positives = 111/121 (90%)
Frame = -2
Query: 629 SPNIVAQDGQYGYQNLFDAMLDAVHAAIDNTKIGYVEVVVSESGWPSDGGSATSYDNARI 450
SPN+V +DGQYGYQNLFDAMLD+VHAAIDNT+IGYVEVVVSESGWPSDGG +YDNAR+
Sbjct: 199 SPNVVVRDGQYGYQNLFDAMLDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYDNARV 258
Query: 449 YLDNLIRHVGRGTPRRPNKPTETYIFAMFDENQKSPEYEKHFGLFSANKQKKYPFGFGGE 270
YLDNL+R GRG+PRRP+KPTETYIFAMFDENQKSPE EKHFGLF +K+KKYPFGFG +
Sbjct: 259 YLDNLVRRAGRGSPRRPSKPTETYIFAMFDENQKSPEIEKHFGLFKPSKEKKYPFGFGAQ 318
Query: 269 R 267
R
Sbjct: 319 R 319
>sp|P23535|E13B_PHAVU Glucan endo-1,3-beta-glucosidase, basic isoform ((1->3)-beta-glucan
endohydrolase) ((1->3)-beta-glucanase)
(Beta-1,3-endoglucanase) gi|1197520|emb|CAA37289.1|
1,3,-beta-D-glucanase [Phaseolus vulgaris]
Length = 348
Score = 220 bits (560), Expect = 1e-56
Identities = 99/121 (81%), Positives = 111/121 (90%)
Frame = -2
Query: 629 SPNIVAQDGQYGYQNLFDAMLDAVHAAIDNTKIGYVEVVVSESGWPSDGGSATSYDNARI 450
SPN+V +DGQYGYQNLFDAMLD+VHAAIDNT+IGYVEVVVSESGWPSDGG +YDNAR+
Sbjct: 199 SPNVVVRDGQYGYQNLFDAMLDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYDNARV 258
Query: 449 YLDNLIRHVGRGTPRRPNKPTETYIFAMFDENQKSPEYEKHFGLFSANKQKKYPFGFGGE 270
YLDNL+R GRG+PRRP+KPTETYIFAMFDENQKSPE EKHFGLF +K+KKYPFGFG +
Sbjct: 259 YLDNLVRRAGRGSPRRPSKPTETYIFAMFDENQKSPEIEKHFGLFKPSKEKKYPFGFGAQ 318
Query: 269 R 267
R
Sbjct: 319 R 319
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 585,970,415
Number of Sequences: 1393205
Number of extensions: 13172914
Number of successful extensions: 35299
Number of sequences better than 10.0: 326
Number of HSP's better than 10.0 without gapping: 33793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34920
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
