Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001593A_C01 KMC001593A_c01
(770 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1... 460 e-128
gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana] 460 e-128
sp|P50246|SAHH_MEDSA Adenosylhomocysteinase (S-adenosyl-L-homocy... 455 e-127
sp|P50248|SAHH_TOBAC Adenosylhomocysteinase (S-adenosyl-L-homocy... 450 e-126
gb|AAF19001.1|AF212157_1 S-adenosylhomocysteine hydrolase [Alliu... 450 e-126
>ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1, supported by cDNA:
16846., supported by cDNA: gi_13358226, supported by
cDNA: gi_14596156, supported by cDNA: gi_15146275,
supported by cDNA: gi_19699157, supported by cDNA:
gi_20148278, supported by cDNA: gi_3088578 [Arabidopsis
thaliana] gi|6174970|sp|O23255|SAHH_ARATH
Adenosylhomocysteinase (S-adenosyl-L-homocysteine
hydrolase) (AdoHcyase) gi|7435510|pir||C71400
adenosylhomocysteinase (EC 3.3.1.1) [similarity] -
Arabidopsis thaliana gi|2244750|emb|CAB10173.1|
adenosylhomocysteinase [Arabidopsis thaliana]
gi|3088579|gb|AAC14714.1| S-adenosyl-L-homocysteine
hydrolase [Arabidopsis thaliana]
gi|7268098|emb|CAB78436.1| adenosylhomocysteinase
[Arabidopsis thaliana]
gi|11762222|gb|AAG40389.1|AF325037_1 AT4g13940
[Arabidopsis thaliana] gi|14596157|gb|AAK68806.1|
adenosylhomocysteinase [Arabidopsis thaliana]
gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w
[Arabidopsis thaliana] gi|19699158|gb|AAL90945.1|
AT4g13940/dl3010w [Arabidopsis thaliana]
gi|20148279|gb|AAM10030.1| adenosylhomocysteinase
[Arabidopsis thaliana] gi|27311597|gb|AAO00764.1|
adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 460 bits (1183), Expect = e-128
Identities = 223/239 (93%), Positives = 234/239 (97%)
Frame = +1
Query: 52 MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGS 231
MALLVEKT+SGREYKVKD+SQADFGRLELELAEVEMPGLMACRTEFGP+QPFKGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 232 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 411
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 412 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKTGELPDPTSTDNPEFQIVLTI 591
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+FEKTG++PDPTSTDNPEFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 592 IRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 768
I++GL+ D +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFD
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFD 239
>gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 460 bits (1183), Expect = e-128
Identities = 223/239 (93%), Positives = 234/239 (97%)
Frame = +1
Query: 52 MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGS 231
MALLVEKT+SGREYKVKD+SQADFGRLELELAEVEMPGLMACRTEFGP+QPFKGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 232 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 411
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 412 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKTGELPDPTSTDNPEFQIVLTI 591
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+FEKTG++PDPTSTDNPEFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 592 IRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 768
I++GL+ D +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFD
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFD 239
>sp|P50246|SAHH_MEDSA Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase)
(AdoHcyase) gi|535584|gb|AAB41814.1|
adenosylhomocysteinase [Medicago sativa]
Length = 485
Score = 455 bits (1170), Expect = e-127
Identities = 222/239 (92%), Positives = 232/239 (96%)
Frame = +1
Query: 52 MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGS 231
MALLVE TTSGREYKVKD+SQADFGRLE+ELAEVEMPGLM+CRTEFGP+QPFKGARITGS
Sbjct: 1 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGS 60
Query: 232 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 411
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 412 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKTGELPDPTSTDNPEFQIVLTI 591
+ERALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEVFEKTG+LPDP+STDN E QIVLTI
Sbjct: 121 SERALDWGPGGGPDLIVDDGGDVTLLIHEGVKAEEVFEKTGQLPDPSSTDNAEMQIVLTI 180
Query: 592 IRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 768
IRDGLKTD RY+KMK R+VGVSEETTTGVKRLYQMQA+GTLLFPAINVNDSVTKSKFD
Sbjct: 181 IRDGLKTDPKRYQKMKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFD 239
>sp|P50248|SAHH_TOBAC Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase)
(AdoHcyase) (Cytokinin binding protein CBP57)
gi|441217|dbj|BAA03709.1| S-adenosyl-L-homocystein
hydrolase [Nicotiana sylvestris]
gi|1857024|dbj|BAA08142.1| S-adenosyl-L-homocysteine
hydrolase [Nicotiana tabacum] gi|2588781|dbj|BAA23164.1|
S-adenosyl-L-homocysteine hydrolase [Nicotiana tabacum]
Length = 485
Score = 450 bits (1158), Expect = e-126
Identities = 220/239 (92%), Positives = 229/239 (95%)
Frame = +1
Query: 52 MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGS 231
MALLVEKTTSGREYKVKD+SQADFGRLE+ELAEVEMPGLMACRTEFGP+QPFKGA+ITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGS 60
Query: 232 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 411
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 412 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKTGELPDPTSTDNPEFQIVLTI 591
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE F K G +PDP STDN EFQ+VLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTI 180
Query: 592 IRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 768
I++ LKTD +Y KMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD
Sbjct: 181 IKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 239
>gb|AAF19001.1|AF212157_1 S-adenosylhomocysteine hydrolase [Allium cepa]
Length = 312
Score = 450 bits (1158), Expect = e-126
Identities = 222/239 (92%), Positives = 230/239 (95%)
Frame = +1
Query: 52 MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGS 231
MALLVEKT+SGREYKVKD+SQADFGRLELELAEV+MPGLMACRTEFGP+QPFKGARITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVDMPGLMACRTEFGPSQPFKGARITGS 60
Query: 232 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 411
L MTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC
Sbjct: 61 LLMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 412 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKTGELPDPTSTDNPEFQIVLTI 591
TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE +EK G LPDP+STDN EFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGTLPDPSSTDNAEFQIVLTI 180
Query: 592 IRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFD 768
IRDGLK D +YRKMKERLVGVSEETTTGVKRLYQMQA+G LLFPAINVNDSVTKSKFD
Sbjct: 181 IRDGLKVDPTKYRKMKERLVGVSEETTTGVKRLYQMQASGALLFPAINVNDSVTKSKFD 239
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 798,022,635
Number of Sequences: 1393205
Number of extensions: 22826913
Number of successful extensions: 219007
Number of sequences better than 10.0: 5259
Number of HSP's better than 10.0 without gapping: 118062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178298
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37815044670
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
