Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001585A_C01 KMC001585A_c01
(736 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD28287.1|AF139377_1 stearoyl acyl carrier protein desaturas... 161 1e-39
gb|AAC49719.1| acyl-acyl carrier protein desaturase 152 4e-36
gb|AAA61559.1| delta-9 stearoyl-acyl carrier protein desaturase ... 152 6e-36
gb|AAO42871.1| At1g43800 [Arabidopsis thaliana] 150 2e-35
ref|NP_175048.1| Expressed protein; protein id: At1g43800.1, sup... 150 2e-35
>gb|AAD28287.1|AF139377_1 stearoyl acyl carrier protein desaturase Lldd3A20 [Lupinus luteus]
Length = 384
Score = 161 bits (408), Expect(2) = 1e-39
Identities = 78/93 (83%), Positives = 84/93 (89%)
Frame = -2
Query: 708 PDGAMVAIGDMMAKKITMPAHLMYDGQDPRLFEHFAAVAQRTGVYTANDYADILENLIER 529
P GAMVAIGDMM KKITMPAHLMYDG+DP+LF+HF+AVAQR GVYTANDYADILE LI R
Sbjct: 267 PTGAMVAIGDMMQKKITMPAHLMYDGEDPKLFDHFSAVAQRMGVYTANDYADILEFLIGR 326
Query: 528 WRLEKLVGLNGEGRKAQDFVCGLAPRIRRLQER 430
WRLEK+ L EG+KAQDFVCGLAPRIRRLQER
Sbjct: 327 WRLEKVQDLKDEGKKAQDFVCGLAPRIRRLQER 359
Score = 23.9 bits (50), Expect(2) = 1e-39
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 391 LKFSWICNNEVVL 353
+KFSWI N E++L
Sbjct: 372 VKFSWIFNKEIIL 384
>gb|AAC49719.1| acyl-acyl carrier protein desaturase
Length = 385
Score = 152 bits (385), Expect = 4e-36
Identities = 77/117 (65%), Positives = 88/117 (74%)
Frame = -2
Query: 708 PDGAMVAIGDMMAKKITMPAHLMYDGQDPRLFEHFAAVAQRTGVYTANDYADILENLIER 529
P GAM+AIG+MM KITMPAHLMYDGQDP LF HF+AVAQR GVYTA DYADILE LI+R
Sbjct: 267 PSGAMLAIGEMMRMKITMPAHLMYDGQDPNLFAHFSAVAQRLGVYTAGDYADILEFLIQR 326
Query: 528 WRLEKLVGLNGEGRKAQDFVCGLAPRIRRLQERG**TGP*DEASRGLSLVGYVIMRW 358
WRLEKL GL + R+AQ+FVCGLAPR+RRLQE+ DE ++ L V W
Sbjct: 327 WRLEKLEGLTDDARRAQEFVCGLAPRMRRLQEKA------DERAKKLRTTTGVKFSW 377
>gb|AAA61559.1| delta-9 stearoyl-acyl carrier protein desaturase precursor
Length = 390
Score = 152 bits (383), Expect = 6e-36
Identities = 70/93 (75%), Positives = 81/93 (86%)
Frame = -2
Query: 708 PDGAMVAIGDMMAKKITMPAHLMYDGQDPRLFEHFAAVAQRTGVYTANDYADILENLIER 529
PDG ++A+ DMM KK++MPAHLMYDGQD LFEHFAAVAQR GVYTA DYADILE L+ R
Sbjct: 275 PDGTVLALADMMRKKVSMPAHLMYDGQDENLFEHFAAVAQRIGVYTAKDYADILEFLVGR 334
Query: 528 WRLEKLVGLNGEGRKAQDFVCGLAPRIRRLQER 430
W +EKL GL+GEGR AQ++VCGLAPRIRRL+ER
Sbjct: 335 WEVEKLTGLSGEGRNAQEYVCGLAPRIRRLEER 367
>gb|AAO42871.1| At1g43800 [Arabidopsis thaliana]
Length = 391
Score = 150 bits (379), Expect = 2e-35
Identities = 77/120 (64%), Positives = 89/120 (74%)
Frame = -2
Query: 708 PDGAMVAIGDMMAKKITMPAHLMYDGQDPRLFEHFAAVAQRTGVYTANDYADILENLIER 529
P+GA+ A+ DMM KKITMPAHLM DG+DP LFEHF+AVAQR VYTA+DYADILE L+ R
Sbjct: 273 PNGAVSAVADMMRKKITMPAHLMTDGRDPMLFEHFSAVAQRLEVYTADDYADILEFLVGR 332
Query: 528 WRLEKLVGLNGEGRKAQDFVCGLAPRIRRLQERG**TGP*DEASRGLSLVGYVIMRWFCD 349
WRLEKL GL GEG++AQ+FVCGLA RIRRLQER DE ++ L V W D
Sbjct: 333 WRLEKLEGLTGEGQRAQEFVCGLAQRIRRLQERA------DERAKKLKKTHEVCFSWIFD 386
>ref|NP_175048.1| Expressed protein; protein id: At1g43800.1, supported by cDNA:
12758. [Arabidopsis thaliana]
Length = 391
Score = 150 bits (379), Expect = 2e-35
Identities = 77/120 (64%), Positives = 89/120 (74%)
Frame = -2
Query: 708 PDGAMVAIGDMMAKKITMPAHLMYDGQDPRLFEHFAAVAQRTGVYTANDYADILENLIER 529
P+GA+ A+ DMM KKITMPAHLM DG+DP LFEHF+AVAQR VYTA+DYADILE L+ R
Sbjct: 273 PNGAVSAVADMMRKKITMPAHLMTDGRDPMLFEHFSAVAQRLEVYTADDYADILEFLVGR 332
Query: 528 WRLEKLVGLNGEGRKAQDFVCGLAPRIRRLQERG**TGP*DEASRGLSLVGYVIMRWFCD 349
WRLEKL GL GEG++AQ+FVCGLA RIRRLQER DE ++ L V W D
Sbjct: 333 WRLEKLEGLTGEGQRAQEFVCGLAQRIRRLQERA------DERAKKLKKTHEVCFSWIFD 386
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 662,312,782
Number of Sequences: 1393205
Number of extensions: 15741931
Number of successful extensions: 51155
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 46661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50846
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
