Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001584A_C01 KMC001584A_c01
(586 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195493.1| homeobox protein HAT22; protein id: At4g37790.1... 155 3e-37
ref|NP_179865.1| homeobox-leucine zipper protein HAT9 (HD-Zip pr... 147 7e-35
pir||T52372 homeobox protein HAT9 [imported] - Arabidopsis thali... 147 7e-35
pir||T52371 homeobox protein HAT9 [imported] - Arabidopsis thali... 147 7e-35
pir||T12616 homeobox protein - common sunflower gi|1032372|gb|AA... 127 8e-29
>ref|NP_195493.1| homeobox protein HAT22; protein id: At4g37790.1, supported by cDNA:
36691., supported by cDNA: gi_527628 [Arabidopsis
thaliana] gi|1170409|sp|P46604|HT22_ARATH
Homeobox-leucine zipper protein HAT22 (HD-ZIP protein
22) gi|7485008|pir||T06026 homeobox protein HAT22
[imported] - Arabidopsis thaliana
gi|549887|gb|AAA56902.1| homeobox protein
gi|549888|gb|AAA56903.1| homeobox protein
gi|4490724|emb|CAB38927.1| homeobox protein HAT22
[Arabidopsis thaliana] gi|7270762|emb|CAB80444.1|
homeobox protein HAT22 [Arabidopsis thaliana]
gi|20145867|emb|CAD29653.1| homeodomain-leucine zipper
protein HAT22 [Arabidopsis thaliana]
gi|21593156|gb|AAM65105.1| homeobox protein HAT22
[Arabidopsis thaliana] gi|26983798|gb|AAN86151.1|
putative homeobox protein HAT22 [Arabidopsis thaliana]
Length = 278
Score = 155 bits (393), Expect = 3e-37
Identities = 77/105 (73%), Positives = 83/105 (78%), Gaps = 10/105 (9%)
Frame = -2
Query: 585 RRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMSAATLTMCP 406
RRARTKLKQTEVDCEFLKKCCETLTDENRRL+KELQ+LKALKL+QP YM M AATLTMCP
Sbjct: 174 RRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCP 233
Query: 405 SCERLGDGG----------SNIKSPFTITPKPHFFNPFTHPSAAC 301
SCERLG GG K F+I KP F+NPFT+PSAAC
Sbjct: 234 SCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNPSAAC 278
>ref|NP_179865.1| homeobox-leucine zipper protein HAT9 (HD-Zip protein 9); protein
id: At2g22800.1, supported by cDNA: gi_527638
[Arabidopsis thaliana] gi|21264431|sp|P46603|HAT9_ARATH
Homeobox-leucine zipper protein HAT9
(Homeodomain-leucine zipper protein HAT9) (Homeodomain
transcription factor HAT9) (HD-ZIP protein 9)
gi|25386219|pir||A84617 homeodomain transcription factor
(HAT9) [imported] - Arabidopsis thaliana
gi|3445197|gb|AAC32427.1| homeodomain transcription
factor (HAT9) [Arabidopsis thaliana]
gi|20197409|gb|AAM15064.1| homeodomain transcription
factor (HAT9) [Arabidopsis thaliana]
Length = 274
Score = 147 bits (372), Expect = 7e-35
Identities = 74/114 (64%), Positives = 81/114 (70%), Gaps = 19/114 (16%)
Frame = -2
Query: 585 RRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMSAATLTMCP 406
RRARTKLKQTEVDCEFLKKCCETL DEN RL+KE+QELK LKL QP YM M A+TLT CP
Sbjct: 161 RRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCP 220
Query: 405 SCERLGDG-------------------GSNIKSPFTITPKPHFFNPFTHPSAAC 301
SCER+G G GS K F+I+ KPHFFNPFT+PSAAC
Sbjct: 221 SCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274
>pir||T52372 homeobox protein HAT9 [imported] - Arabidopsis thaliana
gi|549893|gb|AAA56908.1| homeobox protein
Length = 274
Score = 147 bits (372), Expect = 7e-35
Identities = 74/114 (64%), Positives = 81/114 (70%), Gaps = 19/114 (16%)
Frame = -2
Query: 585 RRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMSAATLTMCP 406
RRARTKLKQTEVDCEFLKKCCETL DEN RL+KE+QELK LKL QP YM M A+TLT CP
Sbjct: 161 RRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCP 220
Query: 405 SCERLGDG-------------------GSNIKSPFTITPKPHFFNPFTHPSAAC 301
SCER+G G GS K F+I+ KPHFFNPFT+PSAAC
Sbjct: 221 SCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274
>pir||T52371 homeobox protein HAT9 [imported] - Arabidopsis thaliana
gi|549892|gb|AAA56907.1| homeobox protein
gi|20145865|emb|CAD29652.1| homeodomain-leucine zipper
protein HAT9 [Arabidopsis thaliana]
Length = 274
Score = 147 bits (372), Expect = 7e-35
Identities = 74/114 (64%), Positives = 81/114 (70%), Gaps = 19/114 (16%)
Frame = -2
Query: 585 RRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMSAATLTMCP 406
RRARTKLKQTEVDCEFLKKCCETL DEN RL+KE+QELK LKL QP YM M A+TLT CP
Sbjct: 161 RRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCP 220
Query: 405 SCERLGDG-------------------GSNIKSPFTITPKPHFFNPFTHPSAAC 301
SCER+G G GS K F+I+ KPHFFNPFT+PSAAC
Sbjct: 221 SCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274
>pir||T12616 homeobox protein - common sunflower gi|1032372|gb|AAA79778.1|
homeodomain protein
Length = 236
Score = 127 bits (320), Expect = 8e-29
Identities = 63/96 (65%), Positives = 76/96 (78%), Gaps = 1/96 (1%)
Frame = -2
Query: 585 RRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMSAATLTMCP 406
RRARTKLKQTEVDCE+LK+CC TLTDEN+RL++E+QELKA K++ LYM + TLT+CP
Sbjct: 143 RRARTKLKQTEVDCEYLKRCCNTLTDENQRLRQEVQELKAQKVSPALYMQLPTTTLTVCP 202
Query: 405 SCERLGDGGS-NIKSPFTITPKPHFFNPFTHPSAAC 301
SCE++GD S K+P T KP FFNPFT SAAC
Sbjct: 203 SCEQIGDTKSATSKNP--CTKKPSFFNPFTSSSAAC 236
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,805,519
Number of Sequences: 1393205
Number of extensions: 10762474
Number of successful extensions: 34287
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 32769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34194
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
