Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001580A_C01 KMC001580A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO69666.1| protein kinase SPK-3 [Phaseolus acutifolius] 189 2e-47
pir||S56716 protein kinase SPK-3 (EC 2.7.1.-) - soybean gi|31058... 188 4e-47
gb|AAB68962.1| protein kinase [Glycine max] 168 4e-41
ref|NP_172563.1| Ser/Thr kinase; protein id: At1g10940.1, suppor... 153 2e-36
pir||S56720 probable serine/threonine-specific protein kinase (E... 152 4e-36
>gb|AAO69666.1| protein kinase SPK-3 [Phaseolus acutifolius]
Length = 159
Score = 189 bits (481), Expect = 2e-47
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = -1
Query: 549 VKEISLKEIKNHPWFLKNLPRELTESAQAVYYQRGGNLSFSVQSVEEIMKIVGEAREPPP 370
++ ISLKEIKNHPWFLKNLPRELTESAQA+YYQRG N SFSVQSVEEIMKIVGEAR+PPP
Sbjct: 54 LRRISLKEIKNHPWFLKNLPRELTESAQALYYQRG-NPSFSVQSVEEIMKIVGEARDPPP 112
Query: 369 VSRPVKGFGWEGEEEDEEDVEEEVEEEEDEEDEYDKRVKEVHASGEFQIS 220
VSRPVKGFGW+GEE++ EE+VEEEEDEEDEYDKRVKEVHASGEFQIS
Sbjct: 113 VSRPVKGFGWDGEEDEG---EEDVEEEEDEEDEYDKRVKEVHASGEFQIS 159
>pir||S56716 protein kinase SPK-3 (EC 2.7.1.-) - soybean
gi|310582|gb|AAB68961.1| protein kinase 3 [Glycine max]
Length = 351
Score = 188 bits (478), Expect = 4e-47
Identities = 94/110 (85%), Positives = 103/110 (93%)
Frame = -1
Query: 549 VKEISLKEIKNHPWFLKNLPRELTESAQAVYYQRGGNLSFSVQSVEEIMKIVGEAREPPP 370
++ ISLKEIK+HPWFLKNLPRELTESAQAVYYQRG N SFS+QSVEEIMKIVGEAR+PPP
Sbjct: 246 LRRISLKEIKSHPWFLKNLPRELTESAQAVYYQRG-NPSFSIQSVEEIMKIVGEARDPPP 304
Query: 369 VSRPVKGFGWEGEEEDEEDVEEEVEEEEDEEDEYDKRVKEVHASGEFQIS 220
VSRPVKGFGW+GEE++ EE+VEEEEDEEDEYDKRVKEVHASGEFQIS
Sbjct: 305 VSRPVKGFGWDGEEDEG---EEDVEEEEDEEDEYDKRVKEVHASGEFQIS 351
>gb|AAB68962.1| protein kinase [Glycine max]
Length = 349
Score = 168 bits (426), Expect = 4e-41
Identities = 85/110 (77%), Positives = 97/110 (87%)
Frame = -1
Query: 549 VKEISLKEIKNHPWFLKNLPRELTESAQAVYYQRGGNLSFSVQSVEEIMKIVGEAREPPP 370
++ I++KEIKNHPWFL+NLPRELTESAQA+YYQR +F +QSV+EIMKIVGEAR PPP
Sbjct: 246 LRRITIKEIKNHPWFLRNLPRELTESAQAIYYQRDSP-NFHLQSVDEIMKIVGEARNPPP 304
Query: 369 VSRPVKGFGWEGEEEDEEDVEEEVEEEEDEEDEYDKRVKEVHASGEFQIS 220
VSR +KGFGWEG EED++EEVEEEED EDEYDKRVKEVHASGEFQIS
Sbjct: 305 VSRALKGFGWEG----EEDLDEEVEEEED-EDEYDKRVKEVHASGEFQIS 349
>ref|NP_172563.1| Ser/Thr kinase; protein id: At1g10940.1, supported by cDNA:
100245., supported by cDNA: gi_20260461, supported by
cDNA: gi_401854 [Arabidopsis thaliana]
gi|1168529|sp|P43291|ASK1_ARATH Serine/threonine-protein
kinase ASK1 gi|541890|pir||S36944 probable
serine/threonine-specific protein kinase (EC 2.7.1.-)
(clone ASK1) - Arabidopsis thaliana
gi|166882|gb|AAA02840.1| serine/threonine kinase
gi|1931648|gb|AAB65483.1| Ser/Thr kinase; 69816-71936
[Arabidopsis thaliana] gi|20260462|gb|AAM13129.1|
Ser/Thr kinase [Arabidopsis thaliana]
gi|21536490|gb|AAM60822.1| Ser/Thr kinase [Arabidopsis
thaliana]
Length = 363
Score = 153 bits (386), Expect = 2e-36
Identities = 79/122 (64%), Positives = 97/122 (78%), Gaps = 9/122 (7%)
Frame = -1
Query: 558 SKSVKEISLKEIKNHPWFLKNLPRELTESAQAVYYQRGGNLSFSVQSVEEIMKIVGEARE 379
+ S+K I++ EIK H WFLKNLPRELTE+AQA Y+++ N +FS+Q+VEEIMKIV +A+
Sbjct: 243 ANSLKRITIAEIKKHSWFLKNLPRELTETAQAAYFKKE-NPTFSLQTVEEIMKIVADAKT 301
Query: 378 PPPVSRPVKGFGW------EGEEEDEEDV---EEEVEEEEDEEDEYDKRVKEVHASGEFQ 226
PPPVSR + GFGW +G+EED EDV EEEVEEEED+EDEYDK VKEVHASGE +
Sbjct: 302 PPPVSRSIGGFGWGGNGDADGKEEDAEDVEEEEEEVEEEEDDEDEYDKTVKEVHASGEVR 361
Query: 225 IS 220
IS
Sbjct: 362 IS 363
>pir||S56720 probable serine/threonine-specific protein kinase (EC 2.7.1.-) BSK1
- rape gi|289372|gb|AAA33003.1| serine/threonine protein
kinase gi|1097353|prf||2113401A protein kinase
Length = 359
Score = 152 bits (383), Expect = 4e-36
Identities = 77/118 (65%), Positives = 93/118 (78%), Gaps = 5/118 (4%)
Frame = -1
Query: 558 SKSVKEISLKEIKNHPWFLKNLPRELTESAQAVYYQRGGNLSFSVQSVEEIMKIVGEARE 379
+ S+K I++ EIK HPWF KNLPRELTE+AQA Y+++ N +FS Q+ EEIMKIV +A+
Sbjct: 243 ANSLKRITIAEIKKHPWFTKNLPRELTETAQAAYFKKE-NPTFSAQTAEEIMKIVDDAKT 301
Query: 378 PPPVSRPVKGFGWEGE-----EEDEEDVEEEVEEEEDEEDEYDKRVKEVHASGEFQIS 220
PPPVSR + GFGW GE +E+EE EEEVEEEEDEEDEYDK VKEVHASGE +IS
Sbjct: 302 PPPVSRSIGGFGWGGEGDLEGKEEEEVDEEEVEEEEDEEDEYDKTVKEVHASGEVRIS 359
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,706,051
Number of Sequences: 1393205
Number of extensions: 10833644
Number of successful extensions: 315211
Number of sequences better than 10.0: 3788
Number of HSP's better than 10.0 without gapping: 83263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192678
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
