Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001576A_C03 KMC001576A_c03
(772 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA33810.1| phi-1 [Nicotiana tabacum] 222 4e-57
ref|NP_192634.1| putative phi-1-like phosphate-induced protein; ... 207 1e-52
gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Ar... 207 1e-52
ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; pr... 201 7e-51
ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, su... 193 2e-50
>dbj|BAA33810.1| phi-1 [Nicotiana tabacum]
Length = 313
Score = 222 bits (566), Expect = 4e-57
Identities = 106/137 (77%), Positives = 118/137 (85%)
Frame = -2
Query: 771 FCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLG 592
FC++RCGTHGSS ++ +GK+YKFAYIWVGNSE QC G CAWPFHQP+YGPQSPP L
Sbjct: 158 FCVNRCGTHGSSKGAI--IRGKTYKFAYIWVGNSETQCAGYCAWPFHQPIYGPQSPP-LV 214
Query: 591 APNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGGLPLRYA 412
APNNDVG+DGMVINLASLLAGTATNPFGNG++QG A+APLEAASACPGVY KG P YA
Sbjct: 215 APNNDVGVDGMVINLASLLAGTATNPFGNGYYQGEADAPLEAASACPGVYAKGAYP-GYA 273
Query: 411 GNLLVDSATGASYNAPG 361
G+LLVD TGASYNA G
Sbjct: 274 GDLLVDKTTGASYNAHG 290
Score = 38.9 bits (89), Expect = 0.082
Identities = 26/51 (50%), Positives = 27/51 (51%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 GFMVKGAYPCVMLGICWLILLLVLATT-----PQGENGRKYLLPALYDPAT 312
G KGAYP LLV TT G NGRKYLLPALYDP+T
Sbjct: 262 GVYAKGAYPGYAGD------LLVDKTTGASYNAHGTNGRKYLLPALYDPST 306
>ref|NP_192634.1| putative phi-1-like phosphate-induced protein; protein id:
At4g08950.1, supported by cDNA: 3552., supported by
cDNA: gi_15450811, supported by cDNA: gi_20259893,
supported by cDNA: gi_20271141 [Arabidopsis thaliana]
gi|25371901|pir||C85090 probable phi-1-like
phosphate-induced protein [imported] - Arabidopsis
thaliana gi|4325369|gb|AAD17365.1| T3H13.3 gene product
[Arabidopsis thaliana] gi|7267537|emb|CAB78019.1|
putative phi-1-like phosphate-induced protein
[Arabidopsis thaliana] gi|15450812|gb|AAK96677.1|
Unknown protein [Arabidopsis thaliana]
gi|20259894|gb|AAM13294.1| unknown protein [Arabidopsis
thaliana] gi|20271142|gb|AAM18526.1|AF496655_1 cell
cycle-related protein [Arabidopsis thaliana]
Length = 314
Score = 207 bits (527), Expect = 1e-52
Identities = 104/137 (75%), Positives = 112/137 (80%)
Frame = -2
Query: 771 FCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLG 592
F MSRCGTHG A +G + KFAYIWVGNSE QCPGQCAWPFH P+YGPQSPP L
Sbjct: 161 FGMSRCGTHGH-ARGLGK---RGSKFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPP-LV 215
Query: 591 APNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGGLPLRYA 412
APNNDVGLDGMVINLASLLAGTATNPFGNG++QG APLEAASACPGVYGKG P YA
Sbjct: 216 APNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQNAPLEAASACPGVYGKGAYP-GYA 274
Query: 411 GNLLVDSATGASYNAPG 361
G+LLVD+ TG S+NA G
Sbjct: 275 GDLLVDTTTGGSFNAYG 291
Score = 35.8 bits (81), Expect = 0.70
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 GFMVKGAYPCVMLGICWLILLLVLATT-----PQGENGRKYLLPALYDPAT 312
G KGAYP LLV TT G NGRK+LLPALYDP T
Sbjct: 263 GVYGKGAYPGYAGD------LLVDTTTGGSFNAYGANGRKFLLPALYDPTT 307
>gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Arabidopsis
thaliana]
Length = 314
Score = 207 bits (527), Expect = 1e-52
Identities = 104/137 (75%), Positives = 112/137 (80%)
Frame = -2
Query: 771 FCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLG 592
F MSRCGTHG A +G + KFAYIWVGNSE QCPGQCAWPFH P+YGPQSPP L
Sbjct: 161 FGMSRCGTHGH-ARGLGK---RGSKFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPP-LV 215
Query: 591 APNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGGLPLRYA 412
APNNDVGLDGMVINLASLLAGTATNPFGNG++QG APLEAASACPGVYGKG P YA
Sbjct: 216 APNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQNAPLEAASACPGVYGKGAYP-GYA 274
Query: 411 GNLLVDSATGASYNAPG 361
G+LLVD+ TG S+NA G
Sbjct: 275 GDLLVDTTTGGSFNAYG 291
Score = 35.8 bits (81), Expect = 0.70
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 GFMVKGAYPCVMLGICWLILLLVLATT-----PQGENGRKYLLPALYDPAT 312
G KGAYP LLV TT G NGRK+LLPALYDP T
Sbjct: 263 GVYGKGAYPGYAGD------LLVDTTTGGSFNAYGANGRKFLLPALYDPTT 307
>ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; protein id:
At1g35140.1, supported by cDNA: 118937., supported by
cDNA: gi_13358189 [Arabidopsis thaliana]
gi|25371902|pir||H86471 probable phosphate-induced
(phi-1) protein [imported] - Arabidopsis thaliana
gi|12320953|gb|AAG50598.1|AC079605_3 phosphate-induced
(phi-1) protein, putative [Arabidopsis thaliana]
gi|21537055|gb|AAM61396.1| phosphate-induced protein
phi-1, putative [Arabidopsis thaliana]
Length = 309
Score = 201 bits (512), Expect = 7e-51
Identities = 97/137 (70%), Positives = 108/137 (78%)
Frame = -2
Query: 771 FCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLG 592
FCM+RCG+HG+ + S K +FAYIWVGNSE QCPGQCAWPFH P+YGPQSPP L
Sbjct: 156 FCMNRCGSHGTGSGS----GKKGSRFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPP-LV 210
Query: 591 APNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGGLPLRYA 412
APNNDVGLDGMVINLASL+A TATNPFG+G++QG APLEA SAC GVYGKG P YA
Sbjct: 211 APNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSACTGVYGKGSYP-GYA 269
Query: 411 GNLLVDSATGASYNAPG 361
G LLVD+ TG SYN G
Sbjct: 270 GELLVDATTGGSYNVKG 286
Score = 35.8 bits (81), Expect = 0.70
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 GFMVKGAYPCVMLGICWLILLLVLATTP-----QGENGRKYLLPALYDPAT 312
G KG+YP + LLV ATT +G NGRKYLLPAL+DP T
Sbjct: 258 GVYGKGSYPG------YAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKT 302
>ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, supported by cDNA:
37357., supported by cDNA: gi_11908087, supported by
cDNA: gi_12642895, supported by cDNA: gi_14190476,
supported by cDNA: gi_16323269 [Arabidopsis thaliana]
gi|11908088|gb|AAG41473.1|AF326891_1 putative phi-1
protein [Arabidopsis thaliana]
gi|12642896|gb|AAK00390.1|AF339708_1 putative phi-1
protein [Arabidopsis thaliana]
gi|14190477|gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10
[Arabidopsis thaliana] gi|16323270|gb|AAL15369.1|
AT5g64260/MSJ1_10 [Arabidopsis thaliana]
gi|21593241|gb|AAM65190.1| phi-1-like protein
[Arabidopsis thaliana]
Length = 305
Score = 193 bits (491), Expect(2) = 2e-50
Identities = 91/137 (66%), Positives = 106/137 (76%)
Frame = -2
Query: 771 FCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLG 592
FCMSRCGTHGSS S+ + + AY+WVGNSE QCPG CAWPFHQP+YGPQ+PP L
Sbjct: 151 FCMSRCGTHGSSGSN---PRRAANGAAYVWVGNSETQCPGYCAWPFHQPIYGPQTPP-LV 206
Query: 591 APNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGGLPLRYA 412
APN DVG+DGM+INLA+LLA T TNPF NG++QG APLEA SACPG++G G P YA
Sbjct: 207 APNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLEAVSACPGIFGSGSYP-GYA 265
Query: 411 GNLLVDSATGASYNAPG 361
G +LVD TG+SYNA G
Sbjct: 266 GRVLVDKTTGSSYNARG 282
Score = 28.1 bits (61), Expect(2) = 2e-50
Identities = 11/16 (68%), Positives = 14/16 (86%)
Frame = -3
Query: 365 QGENGRKYLLPALYDP 318
+G GRKYLLPA++DP
Sbjct: 281 RGLAGRKYLLPAMWDP 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 712,812,252
Number of Sequences: 1393205
Number of extensions: 17202953
Number of successful extensions: 51037
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 46648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50805
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37815044670
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
