Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001559A_C01 KMC001559A_c01
(562 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL87150.1|AF480496_4 putative histidinol phosphate aminotran... 266 1e-70
emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana... 251 4e-66
pir||T03270 probable histidinol-phosphate transaminase (EC 2.6.1... 251 4e-66
ref|NP_177337.1| putative histidinol-phosphate aminotransferase;... 243 9e-64
ref|NP_568226.1| histidinol-phosphate aminotransferase-like prot... 243 9e-64
>gb|AAL87150.1|AF480496_4 putative histidinol phosphate aminotransferase [Oryza sativa
(japonica cultivar-group)]
Length = 378
Score = 266 bits (680), Expect = 1e-70
Identities = 130/147 (88%), Positives = 140/147 (94%)
Frame = -1
Query: 562 IILRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPIYLENV 383
I+LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNP YLE V
Sbjct: 230 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPTYLEEV 289
Query: 382 KDALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGVNAKKLKEDLAQMGVMIRHYDK 203
K+ LL+ER RLYDLLKE+PFL+PFPSHSNFILCEVTSG +AKK+KEDLA+MGVMIRHYDK
Sbjct: 290 KNLLLQERDRLYDLLKEIPFLKPFPSHSNFILCEVTSGKDAKKIKEDLAKMGVMIRHYDK 349
Query: 202 KELKGYVRVSVGKPEHTDALMKCLKRL 122
KELKGY+R+SVGKPEHTDALMK LK L
Sbjct: 350 KELKGYIRISVGKPEHTDALMKGLKAL 376
>emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana plumbaginifolia]
Length = 413
Score = 251 bits (641), Expect = 4e-66
Identities = 123/145 (84%), Positives = 138/145 (94%)
Frame = -1
Query: 562 IILRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPIYLENV 383
I+LRTFSKRAGLAGLRVGYGAFP SIIE+LWRAKQPYNVSVAAEV+ACAAL+NP YLENV
Sbjct: 266 IVLRTFSKRAGLAGLRVGYGAFPKSIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLENV 325
Query: 382 KDALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGVNAKKLKEDLAQMGVMIRHYDK 203
K AL++ER RL++LLKEVPFL P+PS+SNFILC+VTSG++AKKLKEDLA MGVMIRHY+
Sbjct: 326 KVALVQERERLFNLLKEVPFLDPYPSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNS 385
Query: 202 KELKGYVRVSVGKPEHTDALMKCLK 128
KELKGYVRVSVGKPEHT+ALMKCLK
Sbjct: 386 KELKGYVRVSVGKPEHTEALMKCLK 410
>pir||T03270 probable histidinol-phosphate transaminase (EC 2.6.1.9) - common
tobacco gi|3355626|emb|CAA70403.1| histidinol-phosphate
aminotransferase [Nicotiana tabacum]
Length = 413
Score = 251 bits (641), Expect = 4e-66
Identities = 123/145 (84%), Positives = 138/145 (94%)
Frame = -1
Query: 562 IILRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPIYLENV 383
I+LRTFSKRAGLAGLRVGYGAFP SIIE+LWRAKQPYNVSVAAEV+ACAAL+NP YLENV
Sbjct: 266 IVLRTFSKRAGLAGLRVGYGAFPKSIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLENV 325
Query: 382 KDALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGVNAKKLKEDLAQMGVMIRHYDK 203
K AL++ER RL++LLKEVPFL P+PS+SNFILC+VTSG++AKKLKEDLA MGVMIRHY+
Sbjct: 326 KVALVQERERLFNLLKEVPFLDPYPSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNS 385
Query: 202 KELKGYVRVSVGKPEHTDALMKCLK 128
KELKGYVRVSVGKPEHT+ALMKCLK
Sbjct: 386 KELKGYVRVSVGKPEHTEALMKCLK 410
>ref|NP_177337.1| putative histidinol-phosphate aminotransferase; protein id:
At1g71920.1 [Arabidopsis thaliana]
gi|11280235|pir||T50821 histidinol-phosphate
aminotransferase-like protein - Arabidopsis thaliana
gi|8953414|emb|CAB96689.1| histidinol-phosphate
aminotransferase-like protein [Arabidopsis thaliana]
gi|12324546|gb|AAG52232.1|AC021665_15 putative
histidinol-phosphate aminotransferase; 39506-41337
[Arabidopsis thaliana]
Length = 415
Score = 243 bits (621), Expect = 9e-64
Identities = 118/146 (80%), Positives = 135/146 (91%)
Frame = -1
Query: 562 IILRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPIYLENV 383
I+LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA EV+A AAL N YLE+V
Sbjct: 268 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDV 327
Query: 382 KDALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGVNAKKLKEDLAQMGVMIRHYDK 203
+DAL++ER RL+ LLKEVPFL P+PS+SNFILCEVTSG++AKKLKEDLA+MGVM+RHY+
Sbjct: 328 RDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNS 387
Query: 202 KELKGYVRVSVGKPEHTDALMKCLKR 125
+ELKGYVRVS GKPEHTD LM+CLK+
Sbjct: 388 QELKGYVRVSAGKPEHTDVLMECLKQ 413
>ref|NP_568226.1| histidinol-phosphate aminotransferase-like protein; protein id:
At5g10330.1 [Arabidopsis thaliana]
gi|15292797|gb|AAK92767.1| putative histidinol-phosphate
aminotransferase [Arabidopsis thaliana]
gi|21436321|gb|AAM51330.1| putative histidinol-phosphate
aminotransferase [Arabidopsis thaliana]
Length = 417
Score = 243 bits (621), Expect = 9e-64
Identities = 118/146 (80%), Positives = 135/146 (91%)
Frame = -1
Query: 562 IILRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPIYLENV 383
I+LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA EV+A AAL N YLE+V
Sbjct: 270 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDV 329
Query: 382 KDALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGVNAKKLKEDLAQMGVMIRHYDK 203
+DAL++ER RL+ LLKEVPFL P+PS+SNFILCEVTSG++AKKLKEDLA+MGVM+RHY+
Sbjct: 330 RDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNS 389
Query: 202 KELKGYVRVSVGKPEHTDALMKCLKR 125
+ELKGYVRVS GKPEHTD LM+CLK+
Sbjct: 390 QELKGYVRVSAGKPEHTDVLMECLKQ 415
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 455,248,137
Number of Sequences: 1393205
Number of extensions: 9267399
Number of successful extensions: 23456
Number of sequences better than 10.0: 315
Number of HSP's better than 10.0 without gapping: 22254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23303
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
