Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001556A_C02 KMC001556A_c02
(599 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea e... 153 1e-36
gb|AAK76666.1| putative beta-1,3-glucanase [Arabidopsis thaliana] 122 5e-27
ref|NP_191103.1| glycosyl hydrolase family 17 (beta-1,3-glucanas... 120 1e-26
gb|AAM66982.1| beta-1,3-glucanase-like protein [Arabidopsis thal... 120 1e-26
sp|P52409|E13B_WHEAT GLUCAN ENDO-1,3-BETA-GLUCOSIDASE PRECURSOR ... 115 4e-25
>gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea europaea]
Length = 460
Score = 153 bits (387), Expect = 1e-36
Identities = 72/119 (60%), Positives = 87/119 (72%), Gaps = 2/119 (1%)
Frame = -3
Query: 588 SYDFVLFKSGQQTPTTPVTPAPS--AGASWCVAKQGVSDAQLQANLDYVCSQSNIDCGPI 415
+YD L K+ Q PTTP TP P+ A SWCV K GVSD QL N++Y C Q IDCGPI
Sbjct: 344 TYDVGLLKN-TQNPTTPATPTPTPKAAGSWCVPKPGVSDDQLTGNINYACGQG-IDCGPI 401
Query: 414 QSGGACFEPDTVASHASFAMNLYYQTSGRNSWNCDFSQTGMLVSQNPSYNACIYSAGGS 238
Q GGACFEP+TV +HA++ MNLYYQ++GRNSWNCDFSQT L + NPSY AC + +G +
Sbjct: 402 QPGGACFEPNTVKAHAAYVMNLYYQSAGRNSWNCDFSQTATLTNTNPSYGACNFPSGSN 460
>gb|AAK76666.1| putative beta-1,3-glucanase [Arabidopsis thaliana]
Length = 449
Score = 122 bits (305), Expect = 5e-27
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = -3
Query: 585 YDFVLFKSGQQTPTTPVTPAPS-AGASWCVAKQGVSDAQLQANLDYVCSQSNIDCGPIQS 409
YD L +SGQ P PAPS AG WCVA+ G ++ QLQ ++++VC Q +DC PIQ+
Sbjct: 339 YDVGLLRSGQGGGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQG-VDCKPIQA 397
Query: 408 GGACFEPDTVASHASFAMNLYYQTSGRNSWNCDFSQTGMLVSQNPSYNACIY 253
GG+CF P ++ +HASF MN Y+Q+ GR C+FS TGM+V NPS AC Y
Sbjct: 398 GGSCFNPSSLRTHASFVMNAYFQSHGRTDGACNFSGTGMIVGNNPSNGACKY 449
>ref|NP_191103.1| glycosyl hydrolase family 17 (beta-1,3-glucanase); protein id:
At3g55430.1, supported by cDNA: 8980., supported by
cDNA: gi_15028378 [Arabidopsis thaliana]
gi|11279329|pir||T47682 beta-1,3-glucanase-like protein
- Arabidopsis thaliana gi|7076786|emb|CAB75901.1|
beta-1, 3-glucanase-like protein [Arabidopsis thaliana]
gi|23297293|gb|AAN12934.1| putative beta-1,3-glucanase
[Arabidopsis thaliana]
Length = 449
Score = 120 bits (302), Expect = 1e-26
Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = -3
Query: 585 YDFVLFKSGQQTPTTPVTPAPS-AGASWCVAKQGVSDAQLQANLDYVCSQSNIDCGPIQS 409
YD L ++GQ P PAPS AG WCVA+ G ++ QLQ ++++VC Q +DC PIQ+
Sbjct: 339 YDVGLLRNGQGGGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQG-VDCKPIQA 397
Query: 408 GGACFEPDTVASHASFAMNLYYQTSGRNSWNCDFSQTGMLVSQNPSYNACIY 253
GG+CF P ++ +HASF MN Y+Q+ GR C+FS TGM+V NPS AC Y
Sbjct: 398 GGSCFNPSSLRTHASFVMNAYFQSHGRTDGACNFSGTGMIVGNNPSNGACKY 449
>gb|AAM66982.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 449
Score = 120 bits (302), Expect = 1e-26
Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = -3
Query: 585 YDFVLFKSGQQTPTTPVTPAPS-AGASWCVAKQGVSDAQLQANLDYVCSQSNIDCGPIQS 409
YD L ++GQ P PAPS AG WCVA+ G ++ QLQ ++++VC Q +DC PIQ+
Sbjct: 339 YDVGLLRNGQGGGGRPALPAPSTAGGKWCVARSGATNTQLQDSINWVCGQG-VDCKPIQA 397
Query: 408 GGACFEPDTVASHASFAMNLYYQTSGRNSWNCDFSQTGMLVSQNPSYNACIY 253
GG+CF P ++ +HASF MN Y+Q+ GR C+FS TGM+V NPS AC Y
Sbjct: 398 GGSCFNPSSLRTHASFVMNAYFQSHGRTDGACNFSGTGMIVGNNPSNGACKY 449
>sp|P52409|E13B_WHEAT GLUCAN ENDO-1,3-BETA-GLUCOSIDASE PRECURSOR ((1->3)-BETA-GLUCAN
ENDOHYDROLASE) ((1->3)-BETA-GLUCANASE)
(BETA-1,3-ENDOGLUCANASE) gi|7489680|pir||T06268 probable
beta-1,3-glucanase (EC 3.2.1.-) - wheat
gi|924953|gb|AAA90953.1| beta 1,3-glucanase
Length = 461
Score = 115 bits (288), Expect = 4e-25
Identities = 55/123 (44%), Positives = 69/123 (55%), Gaps = 9/123 (7%)
Frame = -3
Query: 594 TMSYDFVLFKSGQQTPTTPVT---------PAPSAGASWCVAKQGVSDAQLQANLDYVCS 442
T YD L + G TP PAPS G WCVAK G + LQ N++Y C
Sbjct: 339 TPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACG 398
Query: 441 QSNIDCGPIQSGGACFEPDTVASHASFAMNLYYQTSGRNSWNCDFSQTGMLVSQNPSYNA 262
+DC PIQSGGACF P+++ +HAS+ MN YYQ +G CDF TG++ S +PSY
Sbjct: 399 F--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGG 456
Query: 261 CIY 253
C Y
Sbjct: 457 CKY 459
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 489,902,297
Number of Sequences: 1393205
Number of extensions: 9883712
Number of successful extensions: 24172
Number of sequences better than 10.0: 143
Number of HSP's better than 10.0 without gapping: 23233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24078
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
