Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001553A_C01 KMC001553A_c01
(1455 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173458.1| sterol-C-methyltransferase; protein id: At1g203... 655 0.0
gb|AAM91592.1| 24-sterol C-methyltransferase [Arabidopsis thalia... 655 0.0
emb|CAA61966.1| sterol-C-methyltransferase [Arabidopsis thaliana... 654 0.0
gb|AAN31890.1| putative sterol-C-methyltransferase [Arabidopsis ... 652 0.0
gb|AAM63753.1| sterol-C-methyltransferase [Arabidopsis thaliana] 648 0.0
>ref|NP_173458.1| sterol-C-methyltransferase; protein id: At1g20330.1, supported by
cDNA: 2688., supported by cDNA: gi_12083241, supported by
cDNA: gi_15028254, supported by cDNA: gi_21281106
[Arabidopsis thaliana] gi|2129517|pir||S63686 sterol
24-C-methyltransferase (EC 2.1.1.41) - Arabidopsis
thaliana gi|9558593|gb|AAF88156.1|AC026234_7 Identical to
24-sterol C-methyltransferase from Arabidopsis thaliana
gi|2129517 and is a member of the ubiE/COQ5
methyltransferase family PF|01209. ESTs gb|T42228,
gb|T46520, gb|T41746, gb|N38458, gb|AI993515,
gb|AA389843, gb|AI099890, gb|AI099653 come from this gene
gi|12083242|gb|AAG48780.1|AF332417_1 putative
sterol-C-methyltransferase [Arabidopsis thaliana]
gi|15028255|gb|AAK76716.1| putative
sterol-C-methyltransferase [Arabidopsis thaliana]
gi|21281107|gb|AAM45009.1| putative
sterol-C-methyltransferase [Arabidopsis thaliana]
Length = 361
Score = 655 bits (1691), Expect = 0.0
Identities = 308/355 (86%), Positives = 334/355 (93%)
Frame = -3
Query: 1381 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRR 1202
MDSL+LF TGAL+A G+YWF+CVLGPAE+KGKRA DLSGGSISAEKVQDNY QYWSFFRR
Sbjct: 1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRR 60
Query: 1201 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIE 1022
PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEE AVDLI+
Sbjct: 61 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQ 120
Query: 1021 AKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCG 842
KPG KILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRAR HNKKAGLD+LCEVVCG
Sbjct: 121 VKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCG 180
Query: 841 NFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENP 662
NFLQMPF D +FDGAYSIEATCHAPKLEEVYAEI+RVLKPG++YVSYEWVTTEK+ AE+
Sbjct: 181 NFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDD 240
Query: 661 EHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAY 482
EHVEVIQGIERGDALPGLR+Y DI A+KVGFE+VKE DLA PPA PWW RLKMGR+AY
Sbjct: 241 EHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300
Query: 481 WRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPK 317
WRNHIVV +L+A+G+APKGTVDVHEMLFKTAD+LTRGG+TGIFSPMHMILCRKP+
Sbjct: 301 WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPE 355
>gb|AAM91592.1| 24-sterol C-methyltransferase [Arabidopsis thaliana]
gi|25083682|gb|AAN72104.1| 24-sterol C-methyltransferase
[Arabidopsis thaliana]
Length = 361
Score = 655 bits (1689), Expect = 0.0
Identities = 308/355 (86%), Positives = 333/355 (93%)
Frame = -3
Query: 1381 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRR 1202
MDSL+LF TGAL+A G+YWF+CVLGPAE+KGKRA DLSGGSISAEKVQDNY QYWSFFRR
Sbjct: 1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRR 60
Query: 1201 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIE 1022
PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEE AVDLI+
Sbjct: 61 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQ 120
Query: 1021 AKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCG 842
KPG KILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRAR HNKKAGLD+LCEVVCG
Sbjct: 121 VKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCG 180
Query: 841 NFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENP 662
NFLQMPF D +FDGAYSIEATCHAPKLEEVYAEI+RVLKPG++YVSYEWVTTEK+ AE+
Sbjct: 181 NFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDD 240
Query: 661 EHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAY 482
EHVEVIQGIERGDALPGLR+Y DI A+KVGFE+VKE DLA PPA PWW RLKMGR+AY
Sbjct: 241 EHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300
Query: 481 WRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPK 317
WRNHIVV +L+A+G+APKGTVDVHEMLFKTAD+LTRGG TGIFSPMHMILCRKP+
Sbjct: 301 WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGQTGIFSPMHMILCRKPE 355
>emb|CAA61966.1| sterol-C-methyltransferase [Arabidopsis thaliana]
gi|1587694|prf||2207220A sterol C-methyltransferase
Length = 361
Score = 654 bits (1686), Expect = 0.0
Identities = 308/355 (86%), Positives = 333/355 (93%)
Frame = -3
Query: 1381 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRR 1202
MDSL+LF TGAL+A G+YWF+CVLGPAE+KGKRA DLSGGSISAEKVQDNY QYWSFFRR
Sbjct: 1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRR 60
Query: 1201 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIE 1022
PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEE AVDLI+
Sbjct: 61 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQ 120
Query: 1021 AKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCG 842
KPG KILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRAR HNKKAGLD+LCEVVCG
Sbjct: 121 VKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCG 180
Query: 841 NFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENP 662
NFLQMPF D +FDGAYSIEATCHAPKLEEVYAEI+RVLKPG++YVSYEWVTTEK+ AE+
Sbjct: 181 NFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDD 240
Query: 661 EHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAY 482
EHVEVIQGIERGDALPGLR+Y DI A+KVGFE+VKE DLA PPA PWW RLKMGR+AY
Sbjct: 241 EHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300
Query: 481 WRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPK 317
WRNHIVV +L+A+G+APKGTVDVHEMLFKTAD LTRGG+TGIFSPMHMILCRKP+
Sbjct: 301 WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADCLTRGGETGIFSPMHMILCRKPE 355
>gb|AAN31890.1| putative sterol-C-methyltransferase [Arabidopsis thaliana]
Length = 361
Score = 652 bits (1683), Expect = 0.0
Identities = 307/353 (86%), Positives = 332/353 (93%)
Frame = -3
Query: 1381 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRR 1202
MDSL+LF TGAL+A G+YWF+CVLGPAE+KGKRA DLSGGSISAEKVQDNY QYWSFFRR
Sbjct: 1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRR 60
Query: 1201 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIE 1022
PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEE AVDLI+
Sbjct: 61 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQ 120
Query: 1021 AKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCG 842
KPG KILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRAR HNKKAGLD+LCEVVCG
Sbjct: 121 VKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCG 180
Query: 841 NFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENP 662
NFLQMPF D +FDGAYSIEATCHAPKLEEVYAEI+RVLKPG++YVSYEWVTTEK+ AE+
Sbjct: 181 NFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDD 240
Query: 661 EHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAY 482
EHVEVIQGIERGDALPGLR+Y DI A+KVGFE+VKE DLA PPA PWW RLKMGR+AY
Sbjct: 241 EHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300
Query: 481 WRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRK 323
WRNHIVV +L+A+G+APKGTVDVHEMLFKTAD+LTRGG+TGIFSPMHMILCRK
Sbjct: 301 WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRK 353
>gb|AAM63753.1| sterol-C-methyltransferase [Arabidopsis thaliana]
Length = 361
Score = 648 bits (1671), Expect = 0.0
Identities = 306/355 (86%), Positives = 332/355 (93%)
Frame = -3
Query: 1381 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRR 1202
MDSL+LF TGAL+A G+YWF+CVLGPAE+KGKRA DLSGGSISAEKVQDNY QYWSFFRR
Sbjct: 1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRR 60
Query: 1201 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIE 1022
PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEE AVDLI+
Sbjct: 61 PKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQ 120
Query: 1021 AKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCG 842
KPG KILDVG GVGG MRAIA+HSRANVVGITINEYQVNRAR HNKKAGLD+LCEVVCG
Sbjct: 121 VKPGQKILDVGXGVGGXMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCG 180
Query: 841 NFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENP 662
NFLQMPF D +FDGAYSIEATCHAPKLEEVYAEI+RVLKPG++YVSYEWVTTEK+ AE+
Sbjct: 181 NFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDD 240
Query: 661 EHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAY 482
EHVEVIQGIERGDALPGLR+Y DI A+KVGFE+VKE DLA PPA PWW RLKMGR+AY
Sbjct: 241 EHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300
Query: 481 WRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPK 317
WRNHIVV +L+A+G+APKGTVDVHEMLFKTAD+LTRGG+TGIFSPMHMILCRKP+
Sbjct: 301 WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPE 355
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,446,804,165
Number of Sequences: 1393205
Number of extensions: 40130858
Number of successful extensions: 382566
Number of sequences better than 10.0: 6974
Number of HSP's better than 10.0 without gapping: 187942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312326
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 97015539684
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
