Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001550A_C01 KMC001550A_c01
(778 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA76734.1| ethylene responsive element binding factor [Nico... 130 2e-29
ref|NP_175479.1| ethylene responsive element binding factor 3 (A... 128 8e-29
ref|NP_188666.1| ethylene responsive element binding factor 7; p... 123 3e-27
gb|EAA32280.1| hypothetical protein ( (AL513467) conserved hypot... 44 0.003
emb|CAD11418.1| conserved hypothetical protein [Neurospora crassa] 44 0.003
>dbj|BAA76734.1| ethylene responsive element binding factor [Nicotiana tabacum]
Length = 225
Score = 130 bits (328), Expect = 2e-29
Identities = 82/152 (53%), Positives = 93/152 (60%), Gaps = 12/152 (7%)
Frame = -2
Query: 777 FPLSPFCYHHPAAADPFYYAAGNNGGVVQDHHHVSNP---QRPTSSGMSSTVESFSGPRP 607
FPL P+ +HH + N+ V + NP QRPTSS MSSTVESFSGPRP
Sbjct: 83 FPL-PYAHHHQFNQG---HNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRP 138
Query: 606 PTVKPAAAPPSSSRRYPRTPPVVPEDCHSDCDSSSSVVDDGD---------DNIVSSSFR 454
P P +SSR+Y R+PPVVP+DCHSDCDSSSSVVD GD DNI SSSFR
Sbjct: 139 PPA-PRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSFR 197
Query: 453 PPLPFDLNAPPCDVADVAAGDDDDIRRTALCL 358
PL FDLN PP + D A DD+ TALCL
Sbjct: 198 KPLLFDLNLPP-PMDDAGA---DDLHCTALCL 225
>ref|NP_175479.1| ethylene responsive element binding factor 3 (AtERF3); protein id:
At1g50640.1, supported by cDNA: gi_3434970 [Arabidopsis
thaliana] gi|7531109|sp|O80339|ERF3_ARATH Ethylene
responsive element binding factor 3 (AtERF3)
gi|25453551|pir||T52011 ethylene responsive element
binding factor 3 [imported] - Arabidopsis thaliana
gi|3434971|dbj|BAA32420.1| ethylene responsive element
binding factor 3 [Arabidopsis thaliana]
gi|9454548|gb|AAF87871.1|AC012561_4 ethylene responsive
element binding factor 3 [Arabidopsis thaliana]
gi|12322345|gb|AAG51201.1|AC079279_22 ethylene
responsive element binding factor 3 (ERF3) [Arabidopsis
thaliana]
Length = 225
Score = 128 bits (322), Expect = 8e-29
Identities = 67/95 (70%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Frame = -2
Query: 663 RPTSSGMSSTVESFSGPRPPTVKPAAAPPSSSRRYPRTPPVVPEDCHSDCDSSSSVVDDG 484
RPTSS MSSTVESFSGPRP T+KPA +++RYPRTPPVVPEDCHSDCDSSSSV+DD
Sbjct: 129 RPTSSSMSSTVESFSGPRPTTMKPA-----TTKRYPRTPPVVPEDCHSDCDSSSSVIDD- 182
Query: 483 DDNIVSSSFR--PPLPFDLNAPPCDVADVAAGDDD 385
DD+I SSS R PP FDLN PP D D+ G DD
Sbjct: 183 DDDIASSSRRRNPPFQFDLNFPPLDCVDLFNGADD 217
>ref|NP_188666.1| ethylene responsive element binding factor 7; protein id:
At3g20310.1, supported by cDNA: 124720., supported by
cDNA: gi_20334801, supported by cDNA: gi_8467961
[Arabidopsis thaliana] gi|8467962|dbj|BAA96653.1| ERF
transcription factor 7 [Arabidopsis thaliana]
gi|9294548|dbj|BAB02811.1| ethylene responsive element
binding factor-like protein [Arabidopsis thaliana]
gi|14335150|gb|AAK59855.1| AT3g20310/MQC12_6
[Arabidopsis thaliana] gi|20334802|gb|AAM16262.1|
AT3g20310/MQC12_6 [Arabidopsis thaliana]
gi|21537240|gb|AAM61581.1| ethylene responsive element
binding factor, putative [Arabidopsis thaliana]
Length = 244
Score = 123 bits (308), Expect = 3e-27
Identities = 76/154 (49%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Frame = -2
Query: 774 PLSPFCYHHPA----------AADPFYYAAGNNGGVVQDHHHVSNPQRPTSSGMSSTVES 625
PL P Y H DPF GG Q+ RP SS MSSTV+S
Sbjct: 91 PLQPLTYLHNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKS 150
Query: 624 FSGPRPPTVKPA----AAPPSSSRRYPRTPPVVPEDCHSDCDSSSSVVDDGDDNIVSSSF 457
SGPRP A A P + +RYPRTPPV PEDCHSDCDSSSSV+DDGDD SSS
Sbjct: 151 CSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSSR 210
Query: 456 R-PPLPFDLNAPPCDVADVAAGDDDDIRRTALCL 358
R P FDLN PP D D+ AG DD+ T L L
Sbjct: 211 RKTPFQFDLNFPPLDGVDLFAGGIDDLHCTDLRL 244
>gb|EAA32280.1| hypothetical protein ( (AL513467) conserved hypothetical protein
[Neurospora crassa] )
Length = 941
Score = 43.5 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = -2
Query: 675 SNPQRPTSSGMSSTVESFSGPRPPTVKPAAAPPSSSRRYPRTPPVVPEDCHSDCDSSSSV 496
+N +SS S+T + P PPT +PA PP S PR P +VP D D D + +
Sbjct: 546 ANRNASSSSAASTTPPPTTQPEPPTTQPAPPPPPSQ---PRQPIIVPSD--GDIDEAEQL 600
Query: 495 VDDGDDNIVSSSFRPPLPFDLNAP 424
+N++S + PLP P
Sbjct: 601 -----NNLLSGASALPLPATARQP 619
>emb|CAD11418.1| conserved hypothetical protein [Neurospora crassa]
Length = 911
Score = 43.5 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = -2
Query: 675 SNPQRPTSSGMSSTVESFSGPRPPTVKPAAAPPSSSRRYPRTPPVVPEDCHSDCDSSSSV 496
+N +SS S+T + P PPT +PA PP S PR P +VP D D D + +
Sbjct: 546 ANRNASSSSAASTTPPPTTQPEPPTTQPAPPPPPSQ---PRQPIIVPSD--GDIDEAEQL 600
Query: 495 VDDGDDNIVSSSFRPPLPFDLNAP 424
+N++S + PLP P
Sbjct: 601 -----NNLLSGASALPLPATARQP 619
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 695,463,783
Number of Sequences: 1393205
Number of extensions: 16722672
Number of successful extensions: 101632
Number of sequences better than 10.0: 269
Number of HSP's better than 10.0 without gapping: 76839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98476
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38375267554
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
