Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001549A_C01 KMC001549A_c01
(403 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172414.1| unknown protein; protein id: At1g09430.1 [Arabi... 112 8e-25
emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus] 110 4e-24
ref|NP_172537.1| ATP citrate-lyase, putative; protein id: At1g10... 105 1e-22
ref|NP_176280.1| ATP citrate-lyase, putative; protein id: At1g60... 105 1e-22
gb|AAL91162.1| similar to ATP-citrate-lyase [Arabidopsis thalian... 105 1e-22
>ref|NP_172414.1| unknown protein; protein id: At1g09430.1 [Arabidopsis thaliana]
gi|25402545|pir||F86227 hypothetical protein [imported]
- Arabidopsis thaliana gi|3482918|gb|AAC33203.1| Similar
to ATP-citrate-lyase [Arabidopsis thaliana]
gi|22022573|gb|AAM83243.1| At1g09430/F19J9_9
[Arabidopsis thaliana] gi|27764922|gb|AAO23582.1|
At1g09430/F19J9_9 [Arabidopsis thaliana]
Length = 424
Score = 112 bits (281), Expect = 8e-25
Identities = 51/58 (87%), Positives = 58/58 (99%)
Frame = -3
Query: 401 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIM 228
++LKA+RMHI+VRRGGPNYQTGLA+MRALGEELGVP+EVYGPEATMTGICK+AIDCIM
Sbjct: 363 TRLKASRMHIYVRRGGPNYQTGLARMRALGEELGVPLEVYGPEATMTGICKRAIDCIM 420
>emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus]
Length = 423
Score = 110 bits (275), Expect = 4e-24
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -3
Query: 401 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSE 222
SKLKAARMHI+VRRGGPNYQ GLAKMR LGEE+G+PIEVYGPEATMTGICK+AI CI +
Sbjct: 363 SKLKAARMHIYVRRGGPNYQKGLAKMRELGEEIGIPIEVYGPEATMTGICKEAIQCITAS 422
Query: 221 A 219
A
Sbjct: 423 A 423
>ref|NP_172537.1| ATP citrate-lyase, putative; protein id: At1g10670.1, supported by
cDNA: 36439., supported by cDNA: gi_15810348, supported
by cDNA: gi_16648641, supported by cDNA: gi_20453213,
supported by cDNA: gi_21280802 [Arabidopsis thaliana]
gi|6573737|gb|AAF17657.1|AC009398_6 F20B24.11
[Arabidopsis thaliana] gi|15810349|gb|AAL07062.1|
putative ATP citrate-lyase [Arabidopsis thaliana]
gi|16648642|gb|AAL25637.1| ATP-citrate lyase subunit A
[Arabidopsis thaliana] gi|20453214|gb|AAM19846.1|
At1g10670/F20B24_11 [Arabidopsis thaliana]
gi|21280803|gb|AAM45027.1| putative ATP citrate-lyase
[Arabidopsis thaliana]
Length = 423
Score = 105 bits (263), Expect = 1e-22
Identities = 50/61 (81%), Positives = 56/61 (90%)
Frame = -3
Query: 401 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSE 222
+KLKAARMHIFVRRGGPNYQ GLAKMRALG+++GVPIEVYGPEATMTGICK+AI I +
Sbjct: 363 AKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIEVYGPEATMTGICKEAIQYITAA 422
Query: 221 A 219
A
Sbjct: 423 A 423
>ref|NP_176280.1| ATP citrate-lyase, putative; protein id: At1g60810.1, supported by
cDNA: gi_19698852 [Arabidopsis thaliana]
gi|25404292|pir||F96633 hypothetical protein F8A5.32
[imported] - Arabidopsis thaliana
gi|2462746|gb|AAB71965.1| Similar to ATP-citrate-lyase
[Arabidopsis thaliana]
Length = 423
Score = 105 bits (263), Expect = 1e-22
Identities = 50/61 (81%), Positives = 56/61 (90%)
Frame = -3
Query: 401 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSE 222
+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E+GVPIEVYGPEATMTGICK+AI I +
Sbjct: 363 AKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYITAA 422
Query: 221 A 219
A
Sbjct: 423 A 423
>gb|AAL91162.1| similar to ATP-citrate-lyase [Arabidopsis thaliana]
gi|22136126|gb|AAM91141.1| similar to ATP-citrate-lyase
[Arabidopsis thaliana]
Length = 423
Score = 105 bits (263), Expect = 1e-22
Identities = 50/61 (81%), Positives = 56/61 (90%)
Frame = -3
Query: 401 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSE 222
+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E+GVPIEVYGPEATMTGICK+AI I +
Sbjct: 363 AKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYITAA 422
Query: 221 A 219
A
Sbjct: 423 A 423
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 355,998,231
Number of Sequences: 1393205
Number of extensions: 7448460
Number of successful extensions: 22012
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 21073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21994
length of database: 448,689,247
effective HSP length: 109
effective length of database: 296,829,902
effective search space used: 7123917648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
