Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001544A_C01 KMC001544A_c01
(672 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T47556 pyruvate kinase-like protein - Arabidopsis thaliana ... 177 1e-43
ref|NP_565850.1| putative pyruvate kinase; protein id: At2g36580... 177 1e-43
ref|NP_566976.1| pyruvate kinase - like protein; protein id: At3... 177 1e-43
gb|AAN18045.1| At2g36580/F1O11.21 [Arabidopsis thaliana] 177 1e-43
pir||C84782 probable pyruvate kinase [imported] - Arabidopsis th... 177 1e-43
>pir||T47556 pyruvate kinase-like protein - Arabidopsis thaliana
gi|7529723|emb|CAB86903.1| pyruvate kinase-like protein
[Arabidopsis thaliana]
Length = 514
Score = 177 bits (449), Expect = 1e-43
Identities = 87/96 (90%), Positives = 93/96 (96%)
Frame = -3
Query: 670 TMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKV 491
TMPV+SVVIPR+KTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSA+NES+LKV
Sbjct: 419 TMPVISVVIPRVKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKV 478
Query: 490 ALDHGKAMGIIKPHDRVVVCQKLGDASVVKIIELED 383
ALDHGK G+IK HDRVVVCQK+GDASVVKIIELED
Sbjct: 479 ALDHGKHAGVIKSHDRVVVCQKVGDASVVKIIELED 514
>ref|NP_565850.1| putative pyruvate kinase; protein id: At2g36580.1, supported by
cDNA: 120685., supported by cDNA: gi_17978969
[Arabidopsis thaliana] gi|17978970|gb|AAL47446.1|
At2g36580/F1O11.21 [Arabidopsis thaliana]
gi|20197921|gb|AAD24640.2| putative pyruvate kinase
[Arabidopsis thaliana]
Length = 527
Score = 177 bits (449), Expect = 1e-43
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = -3
Query: 670 TMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKV 491
TMPVLSVVIPRL TNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSA+NES+LKV
Sbjct: 432 TMPVLSVVIPRLTTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKV 491
Query: 490 ALDHGKAMGIIKPHDRVVVCQKLGDASVVKIIELED 383
ALDHGK G+IK HDRVVVCQK+GDASVVKIIELED
Sbjct: 492 ALDHGKQAGVIKSHDRVVVCQKVGDASVVKIIELED 527
>ref|NP_566976.1| pyruvate kinase - like protein; protein id: At3g52990.1, supported
by cDNA: 12298., supported by cDNA: gi_14194098
[Arabidopsis thaliana]
gi|14194099|gb|AAK56244.1|AF367255_1 AT3g52990/F8J2_160
[Arabidopsis thaliana] gi|21537185|gb|AAM61526.1|
pyruvate kinase-like protein [Arabidopsis thaliana]
gi|23397188|gb|AAN31877.1| putative pyruvate kinase
[Arabidopsis thaliana] gi|24111299|gb|AAN46773.1|
At3g52990/F8J2_160 [Arabidopsis thaliana]
Length = 527
Score = 177 bits (449), Expect = 1e-43
Identities = 87/96 (90%), Positives = 93/96 (96%)
Frame = -3
Query: 670 TMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKV 491
TMPV+SVVIPR+KTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSA+NES+LKV
Sbjct: 432 TMPVISVVIPRVKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKV 491
Query: 490 ALDHGKAMGIIKPHDRVVVCQKLGDASVVKIIELED 383
ALDHGK G+IK HDRVVVCQK+GDASVVKIIELED
Sbjct: 492 ALDHGKHAGVIKSHDRVVVCQKVGDASVVKIIELED 527
>gb|AAN18045.1| At2g36580/F1O11.21 [Arabidopsis thaliana]
Length = 527
Score = 177 bits (449), Expect = 1e-43
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = -3
Query: 670 TMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKV 491
TMPVLSVVIPRL TNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSA+NES+LKV
Sbjct: 432 TMPVLSVVIPRLTTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKV 491
Query: 490 ALDHGKAMGIIKPHDRVVVCQKLGDASVVKIIELED 383
ALDHGK G+IK HDRVVVCQK+GDASVVKIIELED
Sbjct: 492 ALDHGKQAGVIKSHDRVVVCQKVGDASVVKIIELED 527
>pir||C84782 probable pyruvate kinase [imported] - Arabidopsis thaliana
Length = 464
Score = 177 bits (449), Expect = 1e-43
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = -3
Query: 670 TMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKV 491
TMPVLSVVIPRL TNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSA+NES+LKV
Sbjct: 369 TMPVLSVVIPRLTTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKV 428
Query: 490 ALDHGKAMGIIKPHDRVVVCQKLGDASVVKIIELED 383
ALDHGK G+IK HDRVVVCQK+GDASVVKIIELED
Sbjct: 429 ALDHGKQAGVIKSHDRVVVCQKVGDASVVKIIELED 464
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 566,581,329
Number of Sequences: 1393205
Number of extensions: 12010646
Number of successful extensions: 28105
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 27098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28083
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29421376608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
