Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001543A_C01 KMC001543A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD15618.1| similar to phosphatidylinositol (4,5)bisphosphate... 42 0.007
ref|NP_055237.1| phosphatidylinositol (4,5) bisphosphate 5-phosp... 42 0.007
gb|AAB03216.1| phosphatidylinositol (4,5)bisphosphate 5-phosphat... 42 0.007
gb|EAA35516.1| predicted protein [Neurospora crassa] 36 0.37
ref|NP_704910.1| erythrocyte membrane protein 1 (PfEMP1) [Plasmo... 35 0.63
>gb|AAD15618.1| similar to phosphatidylinositol (4,5)bisphosphate 5-phosphatase;
match to PID:g1399105 [Homo sapiens]
Length = 1056
Score = 42.0 bits (97), Expect = 0.007
Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Frame = +3
Query: 219 VPGGYLTKSSPELQNREEEEEEETLLNLIHKNINKKESSDEK--------VENFPAL--- 365
+P L SS + E E+++ L L+ K + FP L
Sbjct: 891 LPSSELASSSTDSSGTSSEGEDDSTLELLAPKSRSPSPGKSKRHRSRSPGLARFPGLALR 950
Query: 366 -----RRGAH*SPIPPSKHARR------GNGLLRGSSTASQAGGYSPEAF----CRKIGV 500
RRGA SP P S+ R NG RGSS +G P AF R +G+
Sbjct: 951 PSSRERRGASRSPSPQSRRLSRVAPDRSSNGSSRGSSEEGPSGLPGPWAFPPAVPRSLGL 1010
Query: 501 RRRSRLIAAAAAGSFTWSSDRLRLPP 578
RL G +W DR L P
Sbjct: 1011 LPALRLETVDPGGGGSWGPDREALAP 1036
>ref|NP_055237.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A; inositol
polyphosphate 5-phosphatase [Homo sapiens]
gi|21755308|dbj|BAC04657.1| unnamed protein product
[Homo sapiens]
Length = 639
Score = 42.0 bits (97), Expect = 0.007
Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Frame = +3
Query: 219 VPGGYLTKSSPELQNREEEEEEETLLNLIHKNINKKESSDEK--------VENFPAL--- 365
+P L SS + E E+++ L L+ K + FP L
Sbjct: 474 LPSSELASSSTDSSGTSSEGEDDSTLELLAPKSRSPSPGKSKRHRSRSPGLARFPGLALR 533
Query: 366 -----RRGAH*SPIPPSKHARR------GNGLLRGSSTASQAGGYSPEAF----CRKIGV 500
RRGA SP P S+ R NG RGSS +G P AF R +G+
Sbjct: 534 PSSRERRGASRSPSPQSRRLSRVAPDRSSNGSSRGSSEEGPSGLPGPWAFPPAVPRSLGL 593
Query: 501 RRRSRLIAAAAAGSFTWSSDRLRLPP 578
RL G +W DR L P
Sbjct: 594 LPALRLETVDPGGGGSWGPDREALAP 619
>gb|AAB03216.1| phosphatidylinositol (4,5)bisphosphate 5-phosphatase homolog
Length = 397
Score = 42.0 bits (97), Expect = 0.007
Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Frame = +3
Query: 219 VPGGYLTKSSPELQNREEEEEEETLLNLIHKNINKKESSDEK--------VENFPAL--- 365
+P L SS + E E+++ L L+ K + FP L
Sbjct: 232 LPSSELASSSTDSSGTSSEGEDDSTLELLAPKSRSPSPGKSKRHRSRSPGLARFPGLALR 291
Query: 366 -----RRGAH*SPIPPSKHARR------GNGLLRGSSTASQAGGYSPEAF----CRKIGV 500
RRGA SP P S+ R NG RGSS +G P AF R +G+
Sbjct: 292 PSSRERRGASRSPSPQSRRLSRVAPDRSSNGSSRGSSEEGPSGLPGPWAFPPAVPRSLGL 351
Query: 501 RRRSRLIAAAAAGSFTWSSDRLRLPP 578
RL G +W DR L P
Sbjct: 352 LPALRLETVDPGGGGSWGPDREALAP 377
>gb|EAA35516.1| predicted protein [Neurospora crassa]
Length = 738
Score = 36.2 bits (82), Expect = 0.37
Identities = 19/62 (30%), Positives = 32/62 (50%)
Frame = +2
Query: 152 KQKTKTKGGSPTNHHLSHRRKSCAGRVSHKKLTGASKSGRRRRRRNPLKLDSQKHKQKRV 331
+Q+ +T G P SH ++ A G SK GR+R+ R PL+ ++++ +RV
Sbjct: 340 QQQQRTLRGRPRARSPSHSAEATASEAKSNSPRGISKRGRKRKLRIPLEGETEQEMLERV 399
Query: 332 LR 337
R
Sbjct: 400 AR 401
>ref|NP_704910.1| erythrocyte membrane protein 1 (PfEMP1) [Plasmodium falciparum 3D7]
gi|23615155|emb|CAD52143.1| erythrocyte membrane protein
1 (PfEMP1) [Plasmodium falciparum 3D7]
Length = 2162
Score = 35.4 bits (80), Expect = 0.63
Identities = 18/48 (37%), Positives = 28/48 (57%)
Frame = +3
Query: 150 KNKKQKRREDHRRTIIFLTGESPVPGGYLTKSSPELQNREEEEEEETL 293
+ KKQ+R++ ++ +G SP TK++ E + EEEEEEE L
Sbjct: 756 QQKKQQRQKQPADKVVSRSGASPDTASPDTKATEEKEEEEEEEEEEDL 803
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 574,874,344
Number of Sequences: 1393205
Number of extensions: 13759477
Number of successful extensions: 59868
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 50627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58358
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
