Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001531A_C02 KMC001531A_c02
(656 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||JQ2128 metallothionein - soybean gi|228682|prf||1808316A me... 161 8e-39
emb|CAA10232.1| metallothionein-like protein class II [Fagus syl... 155 6e-37
sp|Q39459|MT2_CICAR Metallothionein-like protein 2 (MT-2) gi|281... 155 6e-37
sp|P30564|MT2_RICCO Metallothionein-like protein type 2 gi|74418... 152 5e-36
sp|P43398|MTA_TRIRP Metallothionein-like protein A gi|480752|pir... 149 2e-35
>pir||JQ2128 metallothionein - soybean gi|228682|prf||1808316A
metallothionein-like protein
Length = 79
Score = 161 bits (407), Expect = 8e-39
Identities = 69/80 (86%), Positives = 74/80 (92%)
Frame = -1
Query: 593 MSCCNGNCGCGSSCKCGSGCGGCKMYPDMSYTESTTTETLIMGVAPVKAQLEGAEMGVAA 414
MSCC GNCGCGSSCKCG+GCGGCKMYPD+SYTESTTTETL+MGVAPVKAQ EGAEMGV
Sbjct: 1 MSCCGGNCGCGSSCKCGNGCGGCKMYPDLSYTESTTTETLVMGVAPVKAQFEGAEMGV-P 59
Query: 413 AENGGCKCGSNCTCDPCTCK 354
AEN GCKCG NC+C+PCTCK
Sbjct: 60 AENDGCKCGPNCSCNPCTCK 79
>emb|CAA10232.1| metallothionein-like protein class II [Fagus sylvatica]
Length = 79
Score = 155 bits (391), Expect = 6e-37
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = -1
Query: 593 MSCCNGNCGCGSSCKCGSGCGGCKMYPDMSYTESTTTETLIMGVAPVKAQLEGAEMGVAA 414
MSCC GNCGCG+ CKCGSGCGGCK YPD+SYTE TTTETLI+GVAP KA EG+EMGV
Sbjct: 1 MSCCGGNCGCGTGCKCGSGCGGCKAYPDLSYTEKTTTETLIVGVAPQKAHSEGSEMGV-G 59
Query: 413 AENGGCKCGSNCTCDPCTCK 354
AENGGCKCGSNCTCDPC CK
Sbjct: 60 AENGGCKCGSNCTCDPCNCK 79
>sp|Q39459|MT2_CICAR Metallothionein-like protein 2 (MT-2) gi|2815246|emb|CAA65009.1|
class I type 2 metallothionein [Cicer arietinum]
Length = 79
Score = 155 bits (391), Expect = 6e-37
Identities = 67/80 (83%), Positives = 70/80 (86%)
Frame = -1
Query: 593 MSCCNGNCGCGSSCKCGSGCGGCKMYPDMSYTESTTTETLIMGVAPVKAQLEGAEMGVAA 414
MSCC GNCGCGSSCKCGSGCGGCKMYPDMSYTE TT+ETL+MGVA K Q EGAEMG
Sbjct: 1 MSCCGGNCGCGSSCKCGSGCGGCKMYPDMSYTEQTTSETLVMGVASGKTQFEGAEMGF-G 59
Query: 413 AENGGCKCGSNCTCDPCTCK 354
AEN GCKCGSNCTC+PCTCK
Sbjct: 60 AENDGCKCGSNCTCNPCTCK 79
>sp|P30564|MT2_RICCO Metallothionein-like protein type 2 gi|7441825|pir||T10087
metallothionein - castor bean gi|169713|gb|AAC37473.1|
metallothionein
Length = 80
Score = 152 bits (383), Expect = 5e-36
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = -1
Query: 593 MSCCNGNCGCGSSCKCGSGCGGCKMYPDMSYTESTTTETLIMGVAPVKAQLEGAEMGVAA 414
MSCC GNCGCGS CKCG+GCGGCKMYPDMS++E TTTETL++GV KA EG EMGV
Sbjct: 1 MSCCGGNCGCGSGCKCGNGCGGCKMYPDMSFSEKTTTETLVLGVGAEKAHFEGGEMGVVG 60
Query: 413 AENGGCKCGSNCTCDPCTCK 354
AE GGCKCG NCTC+PCTCK
Sbjct: 61 AEEGGCKCGDNCTCNPCTCK 80
>sp|P43398|MTA_TRIRP Metallothionein-like protein A gi|480752|pir||S37239
metallothionein-like protein - white clover
gi|403327|emb|CAA81264.1| metallothionein-like protein
[Trifolium repens]
Length = 77
Score = 149 bits (377), Expect = 2e-35
Identities = 63/80 (78%), Positives = 70/80 (86%)
Frame = -1
Query: 593 MSCCNGNCGCGSSCKCGSGCGGCKMYPDMSYTESTTTETLIMGVAPVKAQLEGAEMGVAA 414
MSCC GNCGCGS+CKCG+GCGGCKM D+SYTESTTTET++MGV KAQ EGAEMG
Sbjct: 1 MSCCGGNCGCGSACKCGNGCGGCKMNADLSYTESTTTETIVMGVGSAKAQFEGAEMG--- 57
Query: 413 AENGGCKCGSNCTCDPCTCK 354
AE+GGCKCG+NCTCDPCTCK
Sbjct: 58 AESGGCKCGANCTCDPCTCK 77
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,959,289
Number of Sequences: 1393205
Number of extensions: 12088338
Number of successful extensions: 62460
Number of sequences better than 10.0: 393
Number of HSP's better than 10.0 without gapping: 50879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59356
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
