Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001528A_C02 KMC001528A_c02
(728 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.19... 195 6e-49
ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; ... 190 2e-47
gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arab... 188 6e-47
pir||T10736 cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - cide... 187 1e-46
ref|NP_175552.1| cinnamyl alcohol dehydrogenase, putative; prote... 174 1e-42
>pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - apple tree
gi|2981475|gb|AAC06319.1| putative cinnamyl alcohol
dehydrogenase [Malus x domestica]
Length = 325
Score = 195 bits (495), Expect = 6e-49
Identities = 93/115 (80%), Positives = 105/115 (90%)
Frame = -1
Query: 728 LNFVNGAPTFANASFGWVNVKDVANAHIQAYEIASASGRHCLVERVVHHSEIVKILRELY 549
LN + GA TF NASFGW+NVKDVANAHIQA+E +ASGR+CLVERV H SE+V+ILRELY
Sbjct: 211 LNVIKGARTFPNASFGWINVKDVANAHIQAFERPTASGRYCLVERVAHFSEVVRILRELY 270
Query: 548 PTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEYIPLEVSLKETVESLKEKKFTHF 384
PTLQLPEKCADDKP+VPTYQVSKEKAKSLG+E+IPL+VSLKETVESLKEK F +F
Sbjct: 271 PTLQLPEKCADDKPFVPTYQVSKEKAKSLGVEFIPLDVSLKETVESLKEKGFVNF 325
>ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; protein id:
At5g19440.1, supported by cDNA: 6748. [Arabidopsis
thaliana]
Length = 326
Score = 190 bits (482), Expect = 2e-47
Identities = 89/115 (77%), Positives = 101/115 (87%)
Frame = -1
Query: 728 LNFVNGAPTFANASFGWVNVKDVANAHIQAYEIASASGRHCLVERVVHHSEIVKILRELY 549
LN +NGA TF N SFGWVNVKDVANAHIQA+E+ SA+GR+CLVERVVHHSEIV ILRELY
Sbjct: 212 LNLINGAKTFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELY 271
Query: 548 PTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEYIPLEVSLKETVESLKEKKFTHF 384
P L LPE+C D+ PYVPTYQVSK+K +SLGI+YIPL+VS+KETVESLKEK F F
Sbjct: 272 PNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGFAQF 326
>gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arabidopsis thaliana]
Length = 326
Score = 188 bits (478), Expect = 6e-47
Identities = 88/115 (76%), Positives = 100/115 (86%)
Frame = -1
Query: 728 LNFVNGAPTFANASFGWVNVKDVANAHIQAYEIASASGRHCLVERVVHHSEIVKILRELY 549
LN +NGA TF N SFGWVNVKDVANAHIQ +E+ SA+GR+CLVERVVHHSEIV ILRELY
Sbjct: 212 LNLINGAKTFPNLSFGWVNVKDVANAHIQTFEVPSANGRYCLVERVVHHSEIVNILRELY 271
Query: 548 PTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEYIPLEVSLKETVESLKEKKFTHF 384
P L LPE+C D+ PYVPTYQVSK+K +SLGI+YIPL+VS+KETVESLKEK F F
Sbjct: 272 PNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGFAQF 326
>pir||T10736 cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - cider tree
gi|1143445|emb|CAA61275.1| cinnamyl alcohol
dehydrogenase [Eucalyptus gunnii]
Length = 327
Score = 187 bits (476), Expect = 1e-46
Identities = 90/114 (78%), Positives = 100/114 (86%)
Frame = -1
Query: 725 NFVNGAPTFANASFGWVNVKDVANAHIQAYEIASASGRHCLVERVVHHSEIVKILRELYP 546
N +NGAPTF NASFGWVNVKDVANAHI A+E+ SASGR+CLVER+ H+SEIV+ILRELYP
Sbjct: 214 NLINGAPTFPNASFGWVNVKDVANAHILAFEVPSASGRYCLVERIAHYSEIVRILRELYP 273
Query: 545 TLQLPEKCADDKPYVPTYQVSKEKAKSLGIEYIPLEVSLKETVESLKEKKFTHF 384
+ QLPEK ADDKP+VP YQVSKEK KSLGI YIPLE +LKETVESLKEK F F
Sbjct: 274 SAQLPEKSADDKPFVPIYQVSKEKVKSLGINYIPLEQNLKETVESLKEKGFVKF 327
>ref|NP_175552.1| cinnamyl alcohol dehydrogenase, putative; protein id: At1g51410.1
[Arabidopsis thaliana] gi|25405464|pir||C96552
hypothetical protein F5D21.12 [imported] - Arabidopsis
thaliana gi|12325359|gb|AAG52618.1|AC024261_5 cinnamyl
alcohol dehydrogenase, putative; 82967-79323 [Arabidopsis
thaliana]
Length = 809
Score = 174 bits (441), Expect = 1e-42
Identities = 80/115 (69%), Positives = 98/115 (84%)
Frame = -1
Query: 728 LNFVNGAPTFANASFGWVNVKDVANAHIQAYEIASASGRHCLVERVVHHSEIVKILRELY 549
L+ + GA TF NA+FGWVNVKDVANAHIQA+E A GR+CLVERV H+SE+V IL +LY
Sbjct: 695 LSLIKGAQTFPNATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLY 754
Query: 548 PTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEYIPLEVSLKETVESLKEKKFTHF 384
P QLPEKCAD+K Y+PTY+VSKEKA+SLG+E++PLEVS+KETVESL++K F F
Sbjct: 755 PDFQLPEKCADEKIYIPTYKVSKEKAESLGVEFVPLEVSIKETVESLRDKGFIRF 809
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 586,914,978
Number of Sequences: 1393205
Number of extensions: 11861217
Number of successful extensions: 26950
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 25801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26910
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34343566934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
