Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001526A_C01 KMC001526A_c01
(235 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF02775.1|AF190728_1 asparagine synthetase [Helianthus annuus] 45 4e-04
dbj|BAB17726.1| asparagine synthetase [Raphanus sativus] 45 4e-04
gb|AAO38524.1| asparagine synthetase [Securigera parviflora] 45 4e-04
sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzin... 45 4e-04
sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzin... 45 4e-04
>gb|AAF02775.1|AF190728_1 asparagine synthetase [Helianthus annuus]
Length = 591
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/22 (90%), Positives = 22/22 (99%)
Frame = -3
Query: 95 LCGILAVLGCSDDSQAQRVRVL 30
+CGILAVLGCSDDSQA+RVRVL
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVL 22
>dbj|BAB17726.1| asparagine synthetase [Raphanus sativus]
Length = 585
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/22 (90%), Positives = 22/22 (99%)
Frame = -3
Query: 95 LCGILAVLGCSDDSQAQRVRVL 30
+CGILAVLGCSDDSQA+RVRVL
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVL 22
>gb|AAO38524.1| asparagine synthetase [Securigera parviflora]
Length = 586
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/22 (90%), Positives = 22/22 (99%)
Frame = -3
Query: 95 LCGILAVLGCSDDSQAQRVRVL 30
+CGILAVLGCSDDSQA+RVRVL
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVL 22
>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing]
(Glutamine-dependent asparagine synthetase)
gi|2429280|gb|AAD05033.1| asparagine synthetase
[Triphysaria versicolor] gi|2429282|gb|AAD05034.1|
asparagine synthetase [Triphysaria versicolor]
gi|2429284|gb|AAD05035.1| asparagine synthetase
[Triphysaria versicolor]
Length = 586
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/22 (90%), Positives = 22/22 (99%)
Frame = -3
Query: 95 LCGILAVLGCSDDSQAQRVRVL 30
+CGILAVLGCSDDSQA+RVRVL
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVL 22
>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing]
(Glutamine-dependent asparagine synthetase)
gi|1084354|pir||S52387 asparagine synthase
(glutamine-hydrolysing) (EC 6.3.5.4) - wild cabbage
gi|669057|emb|CAA59138.1| asparagine synthase
(glutamine-hydrolysing) [Brassica oleracea]
Length = 586
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/22 (90%), Positives = 22/22 (99%)
Frame = -3
Query: 95 LCGILAVLGCSDDSQAQRVRVL 30
+CGILAVLGCSDDSQA+RVRVL
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVL 22
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,516,341
Number of Sequences: 1393205
Number of extensions: 3417006
Number of successful extensions: 18151
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 16133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17827
length of database: 448,689,247
effective HSP length: 53
effective length of database: 374,849,382
effective search space used: 8996385168
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
