Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001519A_C01 KMC001519A_c01
(675 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179548.1| putative senescence-associated protein 5; prote... 158 7e-38
gb|AAL49918.1| putative senescence-associated protein 5 [Arabido... 120 2e-26
ref|NP_199482.1| senescence-associated protein 5-like protein; p... 120 2e-26
ref|NP_200830.1| senescence-associated protein - like; protein i... 94 2e-18
ref|NP_194534.1| senescence-associated protein -like; protein id... 86 5e-16
>ref|NP_179548.1| putative senescence-associated protein 5; protein id: At2g19580.1
[Arabidopsis thaliana] gi|25352437|pir||E84578 probable
senescence-associated protein 5 [imported] - Arabidopsis
thaliana gi|4191796|gb|AAD10165.1| putative
senescence-associated protein 5 [Arabidopsis thaliana]
Length = 270
Score = 158 bits (399), Expect = 7e-38
Identities = 70/90 (77%), Positives = 79/90 (87%)
Frame = -1
Query: 675 FVSPILWTEPVNPMADPDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVV 496
FV+P LW P N AD DC LW+NDQ+QLCYNCN+CKAGLLGNLRKEWRKAN+ILI+ VV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240
Query: 495 VLICVYIIACSAFKNAQTEDLFDRYKQGWV 406
VLI VY+IACSAF+NAQTEDLF +YKQGWV
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270
>gb|AAL49918.1| putative senescence-associated protein 5 [Arabidopsis thaliana]
Length = 269
Score = 120 bits (301), Expect = 2e-26
Identities = 50/89 (56%), Positives = 69/89 (77%)
Frame = -1
Query: 675 FVSPILWTEPVNPMADPDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVV 496
FV+P W P++ AD DC W+NDQN LCY C++CKAGLL N++ +W KA+I L++A++
Sbjct: 180 FVNPTYWVSPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALI 239
Query: 495 VLICVYIIACSAFKNAQTEDLFDRYKQGW 409
LI VYII C AF+NA+TED+F +YKQG+
Sbjct: 240 GLIIVYIIGCCAFRNAETEDIFRKYKQGY 268
>ref|NP_199482.1| senescence-associated protein 5-like protein; protein id:
At5g46700.1, supported by cDNA: gi_17979385 [Arabidopsis
thaliana] gi|9758506|dbj|BAB08914.1|
senescence-associated protein 5-like protein
[Arabidopsis thaliana]
Length = 269
Score = 120 bits (300), Expect = 2e-26
Identities = 50/89 (56%), Positives = 69/89 (77%)
Frame = -1
Query: 675 FVSPILWTEPVNPMADPDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVV 496
FV+P W P++ AD DC W+NDQN LCY C++CKAGLL N++ +W KA+I L++A++
Sbjct: 180 FVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALI 239
Query: 495 VLICVYIIACSAFKNAQTEDLFDRYKQGW 409
LI VYII C AF+NA+TED+F +YKQG+
Sbjct: 240 GLIIVYIIGCCAFRNAETEDIFRKYKQGY 268
>ref|NP_200830.1| senescence-associated protein - like; protein id: At5g60220.1
[Arabidopsis thaliana] gi|8885573|dbj|BAA97503.1|
contains similarity to senescence-associated
protein~gene_id:F15L12.11 [Arabidopsis thaliana]
Length = 327
Score = 93.6 bits (231), Expect = 2e-18
Identities = 40/80 (50%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Frame = -1
Query: 675 FVSPILWT---EPVNPMADPDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIV 505
+V+ +W E V P +PDC LWNNDQ LCY C++CKAG+LG+L+K WRK ++I IV
Sbjct: 185 YVNETVWIPGGEMVGP--NPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIV 242
Query: 504 AVVVLICVYIIACSAFKNAQ 445
V++L+ Y+IAC+A++N +
Sbjct: 243 VVIILVIFYVIACAAYQNVK 262
>ref|NP_194534.1| senescence-associated protein -like; protein id: At4g28050.1,
supported by cDNA: 39831., supported by cDNA:
gi_17065395, supported by cDNA: gi_20148628 [Arabidopsis
thaliana] gi|7488327|pir||T02906 senescence-associated
protein homolog T13J8.160 - Arabidopsis thaliana
gi|4455364|emb|CAB36774.1| senescence-associated
protein-like [Arabidopsis thaliana]
gi|7269659|emb|CAB79607.1| senescence-associated
protein-like [Arabidopsis thaliana]
gi|17065396|gb|AAL32852.1| senescence-associated
protein-like [Arabidopsis thaliana]
gi|20148629|gb|AAM10205.1| senescence-associated
protein-like [Arabidopsis thaliana]
gi|21593528|gb|AAM65495.1| senescence-associated
protein-like [Arabidopsis thaliana]
Length = 263
Score = 85.9 bits (211), Expect = 5e-16
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = -1
Query: 675 FVSPILWTEPVNPMADPDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVV 496
+V+P WT+ P + DCN+W+N LCY+C ACKAGLL N++ W+K + IV ++
Sbjct: 183 YVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLI 242
Query: 495 VLICVYIIACSAFKN 451
LI VY + C AF+N
Sbjct: 243 FLIIVYSVGCCAFRN 257
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 579,901,599
Number of Sequences: 1393205
Number of extensions: 12612067
Number of successful extensions: 33367
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 31879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33356
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
