Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001515A_C02 KMC001515A_c02
(823 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196885.1| putative protein; protein id: At5g13810.1, supp... 149 6e-35
dbj|BAC15489.1| hypothetical protein~similar to Arabidopsis thal... 115 8e-25
ref|NP_181664.1| unknown protein; protein id: At2g41330.1, suppo... 108 1e-22
ref|NP_200661.1| putative protein; protein id: At5g58530.1 [Arab... 107 2e-22
ref|NP_567043.1| putative protein; protein id: At3g57070.1, supp... 106 4e-22
>ref|NP_196885.1| putative protein; protein id: At5g13810.1, supported by cDNA:
124023., supported by cDNA: gi_14532459, supported by
cDNA: gi_16974532 [Arabidopsis thaliana]
gi|10177647|dbj|BAB11109.1| contains similarity to
unknown protein~emb|CAB72177.1~gene_id:MAC12.24
[Arabidopsis thaliana] gi|14532460|gb|AAK63958.1|
AT5g13810/MAC12_24 [Arabidopsis thaliana]
gi|16974533|gb|AAL31176.1| AT5g13810/MAC12_24
[Arabidopsis thaliana] gi|21618248|gb|AAM67298.1|
unknown [Arabidopsis thaliana]
Length = 274
Score = 149 bits (375), Expect = 6e-35
Identities = 70/106 (66%), Positives = 83/106 (78%)
Frame = -1
Query: 823 KKELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCE 644
+KEL GEK+ V LPQVFI G+ VGGADVIK L E+GEL KIL+ P +PGFVC
Sbjct: 172 RKELQIAMGEKS---VSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCH 228
Query: 643 SCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCSS 506
CGD+RFVPC NCSGS+K+FD+DE +KRC ECNENGL+RCP+CSS
Sbjct: 229 CCGDIRFVPCSNCSGSKKLFDEDEDRVKRCPECNENGLIRCPDCSS 274
>dbj|BAC15489.1| hypothetical protein~similar to Arabidopsis thaliana chromosome 5,
At5g13810 [Oryza sativa (japonica cultivar-group)]
Length = 211
Score = 115 bits (288), Expect = 8e-25
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = -1
Query: 823 KKELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCE 644
++EL L + R LPQ+ + GR VGGAD +KQL E G+L ++L+G P +VC+
Sbjct: 107 RRELRSLLDARG-RAFSLPQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYVCD 165
Query: 643 SCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCSS 506
CG +RFVPC C G RKVF ++E ++RC +CNENGL+RCPNC S
Sbjct: 166 GCGGVRFVPCTACGGGRKVFVEEEDRVQRCGDCNENGLVRCPNCCS 211
>ref|NP_181664.1| unknown protein; protein id: At2g41330.1, supported by cDNA:
gi_18491270 [Arabidopsis thaliana]
gi|25342044|pir||D84840 hypothetical protein At2g41330
[imported] - Arabidopsis thaliana
gi|3894191|gb|AAC78540.1| unknown protein [Arabidopsis
thaliana] gi|18491271|gb|AAL69460.1| At2g41330/F13H10.12
[Arabidopsis thaliana]
Length = 402
Score = 108 bits (270), Expect = 1e-22
Identities = 54/104 (51%), Positives = 68/104 (64%)
Frame = -1
Query: 823 KKELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCE 644
+KEL GE+ + V LPQVFIRG +GG + IK L + GEL ++L+ P + C+
Sbjct: 299 RKELQNALGEE--KPVCLPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACESIGACD 356
Query: 643 SCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNC 512
SCGD RFVPC NC GS KVF++ E KRC CNENGL+RC C
Sbjct: 357 SCGDARFVPCTNCGGSTKVFEEQEDGFKRCNGCNENGLVRCNKC 400
>ref|NP_200661.1| putative protein; protein id: At5g58530.1 [Arabidopsis thaliana]
gi|10177031|dbj|BAB10269.1|
emb|CAB72177.1~gene_id:MQJ2.15~similar to unknown
protein [Arabidopsis thaliana]
gi|26449512|dbj|BAC41882.1| unknown protein [Arabidopsis
thaliana] gi|28950827|gb|AAO63337.1| At5g58530
[Arabidopsis thaliana]
Length = 273
Score = 107 bits (267), Expect = 2e-22
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Frame = -1
Query: 817 ELMGLFGEKNMRNV------VLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPG 656
EL +FG+ +N LP+VFI GR +GGA+ +KQL E+GEL K+++ LP+ +PG
Sbjct: 160 ELQRIFGKDQNQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELPKIEPG 219
Query: 655 FVCESCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCS 509
VCE CG RFVPC +C GS KV + G + CL CNENGL+RC +CS
Sbjct: 220 -VCEMCGGHRFVPCKDCHGSHKVHTEKLG-FRTCLTCNENGLVRCSSCS 266
>ref|NP_567043.1| putative protein; protein id: At3g57070.1, supported by cDNA:
gi_15451041 [Arabidopsis thaliana]
gi|15451042|gb|AAK96792.1| putative protein [Arabidopsis
thaliana] gi|23197624|gb|AAN15339.1| putative protein
[Arabidopsis thaliana]
Length = 302
Score = 106 bits (265), Expect = 4e-22
Identities = 52/104 (50%), Positives = 67/104 (64%)
Frame = -1
Query: 823 KKELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCE 644
+KEL + G + V LPQVFIRG +GG + I QL + GEL ++L+ P + C
Sbjct: 198 RKELQSVLGAAE-KPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACERLGTCR 256
Query: 643 SCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNC 512
SCGD RFVPC NC GS KVF++ + KRC +CNENGL+RC C
Sbjct: 257 SCGDARFVPCTNCDGSTKVFEEQDERFKRCPKCNENGLVRCRVC 300
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 772,831,062
Number of Sequences: 1393205
Number of extensions: 18936659
Number of successful extensions: 108813
Number of sequences better than 10.0: 915
Number of HSP's better than 10.0 without gapping: 70390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97273
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 42576939184
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
