Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001511A_C03 KMC001511A_c03
(700 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T11577 type IIIa membrane protein cp-wap13 - cowpea gi|2218... 178 7e-44
emb|CAA09469.1| RGP1 protein [Oryza sativa (japonica cultivar-gr... 174 1e-42
pir||T06507 reversibly glycosylatable polypeptide 1 - garden pea... 174 1e-42
emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tu... 173 2e-42
pir||T11576 type IIIa membrane protein cp-wap11 - cowpea gi|2218... 172 3e-42
>pir||T11577 type IIIa membrane protein cp-wap13 - cowpea
gi|2218152|gb|AAB61672.1| type IIIa membrane protein
cp-wap13 [Vigna unguiculata]
Length = 346
Score = 178 bits (451), Expect = 7e-44
Identities = 78/80 (97%), Positives = 80/80 (99%)
Frame = -1
Query: 700 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 521
QPIGRYDDMWAGWC+KVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP
Sbjct: 203 QPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 262
Query: 520 FFQSATLPKDCTSVQKCYIE 461
FFQSATLPK+CTSVQKCYIE
Sbjct: 263 FFQSATLPKECTSVQKCYIE 282
Score = 86.7 bits (213), Expect = 3e-16
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Frame = -2
Query: 534 KRSFHFSNLLPFQKTAPLFKSAT------LNLSKQVKEKLGPVDPYFNKLGDAMVTWIEA 373
K F ++PF ++A L K T + LSKQVKEKLG VDPYFNKL DAMVTWIEA
Sbjct: 252 KGIFWQEEIIPFFQSATLPKECTSVQKCYIELSKQVKEKLGAVDPYFNKLADAMVTWIEA 311
Query: 372 WDELNYSSEEVSSKPNG 322
WDELN +SE+ SSK G
Sbjct: 312 WDELNNTSEQTSSKKAG 328
>emb|CAA09469.1| RGP1 protein [Oryza sativa (japonica cultivar-group)]
Length = 349
Score = 174 bits (440), Expect = 1e-42
Identities = 80/111 (72%), Positives = 90/111 (81%)
Frame = -1
Query: 700 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 521
QPIGRYDDMWAGWC+KVICDHL LGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQE+IIP
Sbjct: 239 QPIGRYDDMWAGWCMKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIP 298
Query: 520 FFQSATLPKDCTSVQKCYIEPLQASQGEAWPC*SLFQQARRCYGHLD*SLG 368
FFQ+AT+PK+C +VQK P + G + + QA RC+GHLD LG
Sbjct: 299 FFQNATIPKECDTVQKLLPLPRPSRSGRSSARSTPICQACRCHGHLDRGLG 349
>pir||T06507 reversibly glycosylatable polypeptide 1 - garden pea
gi|2130521|gb|AAB88408.1| reversibly glycosylatable
polypeptide [Pisum sativum]
Length = 364
Score = 174 bits (440), Expect = 1e-42
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = -1
Query: 700 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 521
QPIGRYDDMWAGWCIKVICDHLG GVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP
Sbjct: 232 QPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 291
Query: 520 FFQSATLPKDCTSVQKCYIE 461
FFQ+ATL KDCTSVQKCYIE
Sbjct: 292 FFQAATLSKDCTSVQKCYIE 311
Score = 75.5 bits (184), Expect = 7e-13
Identities = 42/82 (51%), Positives = 51/82 (61%), Gaps = 8/82 (9%)
Frame = -2
Query: 534 KRSFHFSNLLPFQKTAPLFKSAT------LNLSKQVKEKLGPVDPYFNKLGDAMVTWIEA 373
K F ++PF + A L K T + LSKQVKEKLG +DPYF KL DAMVTW+EA
Sbjct: 281 KGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEA 340
Query: 372 WDEL--NYSSEEVSSKPNGAAA 313
WDE+ N S E S+K + AA
Sbjct: 341 WDEINNNKSEETTSTKASEVAA 362
>emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tuberosum]
Length = 366
Score = 173 bits (439), Expect = 2e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -1
Query: 700 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 521
QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGI+WQEEIIP
Sbjct: 233 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIP 292
Query: 520 FFQSATLPKDCTSVQKCYIE 461
F QSATLPKDCTSVQ+CY+E
Sbjct: 293 FSQSATLPKDCTSVQQCYLE 312
Score = 77.0 bits (188), Expect = 2e-13
Identities = 39/71 (54%), Positives = 48/71 (66%), Gaps = 6/71 (8%)
Frame = -2
Query: 510 LLPFQKTAPLFKSAT------LNLSKQVKEKLGPVDPYFNKLGDAMVTWIEAWDELNYSS 349
++PF ++A L K T L LSKQVKEKL +DPYF KL DAMVTWIEAWDELN +
Sbjct: 290 IIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNPTG 349
Query: 348 EEVSSKPNGAA 316
E ++ P+ A
Sbjct: 350 EGLAKLPSRTA 360
>pir||T11576 type IIIa membrane protein cp-wap11 - cowpea
gi|2218150|gb|AAB61671.1| type IIIa membrane protein
cp-wap11 [Vigna unguiculata]
Length = 322
Score = 172 bits (437), Expect = 3e-42
Identities = 79/111 (71%), Positives = 89/111 (80%)
Frame = -1
Query: 700 QPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIP 521
QPIGRYDDMWAGWC KVICDHLGLG+KTGLPYI+HSKASNPFVNL+KEYKGIFWQE+IIP
Sbjct: 141 QPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIP 200
Query: 520 FFQSATLPKDCTSVQKCYIEPLQASQGEAWPC*SLFQQARRCYGHLD*SLG 368
FFQS LPK+ T+VQKCYI + + + F Q RC+GHLD LG
Sbjct: 201 FFQSIVLPKEATTVQKCYIVLAKLVKEKLSKVDPYFGQVGRCHGHLDLKLG 251
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,132,019
Number of Sequences: 1393205
Number of extensions: 12989833
Number of successful extensions: 68869
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 40843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64445
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31967457276
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
