Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001507A_C01 KMC001507A_c01
(1201 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563785.1| extensin-related; protein id: At1g07310.1, supp... 197 3e-49
dbj|BAB84404.1| P0529E05.20 [Oryza sativa (japonica cultivar-gro... 191 2e-47
ref|NP_046248.1| unknown [Orgyia pseudotsugata multicapsid nucle... 94 3e-18
ref|ZP_00116439.1| hypothetical protein [Synechococcus sp. WH 8102] 93 1e-17
gb|AAA59875.1| mucin 92 2e-17
>ref|NP_563785.1| extensin-related; protein id: At1g07310.1, supported by cDNA:
gi_15451131, supported by cDNA: gi_20148320 [Arabidopsis
thaliana] gi|8778551|gb|AAF79559.1|AC022464_17 F22G5.35
[Arabidopsis thaliana] gi|15451132|gb|AAK96837.1| similar
to SRC2 [Arabidopsis thaliana] gi|20148321|gb|AAM10051.1|
similar to SRC2 dbj|BAA19769 [Arabidopsis thaliana]
Length = 352
Score = 197 bits (501), Expect = 3e-49
Identities = 129/297 (43%), Positives = 156/297 (52%), Gaps = 39/297 (13%)
Frame = -2
Query: 1164 MTSSRPPPSKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSP 985
MTSS P +DL +T+VSAKHLKNVNW+ GDLKPYVV ++D D L+T+SDDS + P
Sbjct: 1 MTSSEP-----LDLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRSDDSSSIKP 55
Query: 984 VWNERFTLPLSHPITDSFLTLEIFHSKPSDTPKPLVATVRLLLADLHDLHDS---SSIRK 814
VWNER TLPL+ + +S L +E+FHS SD K LV +VR LA L D S I
Sbjct: 56 VWNERITLPLTRSVHESVLNIEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELINS 115
Query: 813 FTLLRPSGRPHGKIHLKLGLLGRP-------------QPLDY---PNPSSNPNPNPNPNC 682
L+RPSGRP GKI LKL + RP QPLDY P + +P+P P
Sbjct: 116 LELVRPSGRPQGKIRLKLAIKDRPIPPPQHPPPRPQSQPLDYYSAPQGNHYYSPSPPPPP 175
Query: 681 NPSFLYYRGYTPSP-------SQSQPPSPYSSSYTSYAADSYTGGYYPGYYSGAPPPPPP 523
P PSP SQS PSPY ++T YY GYY PPPP
Sbjct: 176 PPQAPI---TAPSPQRDYREFSQSPSPSPY----------AFTDHYYSGYYY----PPPP 218
Query: 522 PRPFFDRPGGYSGLSGPSAPLDYSSA-------------SSYDPKPRGAKMGLGAGL 391
PR +DR Y SGPSAP+D S+ S+Y P P G + A L
Sbjct: 219 PRSMYDRASNYGLPSGPSAPVDAFSSIDHKQPPLAPPRFSNYGPPPSGPSAPVDAFL 275
>dbj|BAB84404.1| P0529E05.20 [Oryza sativa (japonica cultivar-group)]
Length = 327
Score = 191 bits (485), Expect = 2e-47
Identities = 126/313 (40%), Positives = 166/313 (52%), Gaps = 23/313 (7%)
Frame = -2
Query: 1149 PPPS---KSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVW 979
PPP+ K++DL++T+VS KHLKNVNW+ GDL+ YVV ++DP RR AT+ DD G P W
Sbjct: 39 PPPAAPLKAIDLEVTVVSGKHLKNVNWRRGDLRAYVVAYLDPSRRAATRPDDVGGCKPAW 98
Query: 978 NERFTLPLSHPITDS----FLTLEIFHSKPSDTPKPLVATVRLLLADL------HDLHDS 829
NER LPL ++ L+L++FHSKPSD+PKPLV + R L DL + DS
Sbjct: 99 NERVVLPLPPHLSPHDPSLLLSLDVFHSKPSDSPKPLVGSARSPLRDLLFSTNPNPSPDS 158
Query: 828 --SSIRKFTLLRPSGRPHGKIHLKLGLLGR----PQPLDYPNPSSNPNPNPNPNCNPSFL 667
S++ LLRPSGRP GK+ ++L L R P+P YP PSS+P
Sbjct: 159 PASALITLPLLRPSGRPQGKLRIRLALRERSPPPPEP-QYPPPSSSP------------- 204
Query: 666 YYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGYYPGYYSGAPPPPPPPRPFFDRPGGYS 487
YY P P+ S PP P S Y + GGYY APPPPP Y
Sbjct: 205 YYFPPPPPPAYSAPPPPQYGSEQYYRS----GGYY-----SAPPPPPQ----------YE 245
Query: 486 GLSGPSAPLDYSSASSYDPKPRGA----KMGLGAGLAVGAVARGSGRACFGRRAEIRRGH 319
+GPSAP++Y+ YDP+ + G+G G+AVG V G + +
Sbjct: 246 YTAGPSAPVEYNR--QYDPRAGSGSGNGRYGVGTGIAVGTVTGALGGLAIDEGVKYKE-E 302
Query: 318 GSPERVENGVAAA 280
S +RVE+ V A
Sbjct: 303 KSADRVEDKVVPA 315
Score = 35.8 bits (81), Expect = 1.4
Identities = 20/47 (42%), Positives = 20/47 (42%)
Frame = -1
Query: 865 PPPRRPPRPP*FLQHPQIHPPPPLRPPPRQDPPQARPPWSPPTPRLP 725
P P P P QH HP PP P Q PP PP PP P P
Sbjct: 4 PSPSSSPLHP---QHQHQHPLPPHPQPQYQSPP---PPMPPPPPAAP 44
>ref|NP_046248.1| unknown [Orgyia pseudotsugata multicapsid nucleopolyhedrovirus]
gi|2493240|sp|O10341|Y091_NPVOP HYPOTHETICAL 29.3 KD
PROTEIN (ORF92) gi|7515481|pir||T10361 hypothetical
protein 92 - Orgyia pseudotsugata nuclear polyhedrosis
virus gi|1911338|gb|AAC59091.1| unknown [Orgyia
pseudotsugata multicapsid nucleopolyhedrovirus]
Length = 279
Score = 94.4 bits (233), Expect = 3e-18
Identities = 63/172 (36%), Positives = 85/172 (48%), Gaps = 17/172 (9%)
Frame = -3
Query: 1160 HHLVLLRRSRWISTS-----PSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPA 996
++++++ + W+ TS + PP S T T P+ + T + TPT P PT
Sbjct: 9 NYIIIILLTLWLLTSLKQNIETKPPLPSPTPTPTPSPTP-TPTPSPTPTPTPTPTPTPTP 67
Query: 995 TPPPSGTSV-------SPSLSLTPSLTPF-----SPSRSSTPNPPIPPNPSSPPSASSSP 852
TP P+ T SP+LS TPS TP SP+ S TP P P+P+ PS + SP
Sbjct: 68 TPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP 127
Query: 851 TSTTSMIPPASANSPSSAPPAAPTARSTSSSASLVAPNPSITPTQAPTPTLT 696
T T S P S +PS P PT T S +P PS TPT +PTP+ T
Sbjct: 128 TPTPSPTPTPSP-TPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPT 178
Score = 80.1 bits (196), Expect = 6e-14
Identities = 55/138 (39%), Positives = 65/138 (46%)
Frame = -3
Query: 1118 SPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVSPSLSLTPSL 939
SP+ P++S T T P S S TPT P+PT TP PS T PS + TPS
Sbjct: 70 SPTPTPALSPTPTPSPTLSPTPSP---TPTPSPTPSPTPSPTPTPSPT---PSPTPTPSP 123
Query: 938 TPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSSAPPAAPTARSTSSS 759
TP S TP P P PS PS + SPT T S P SP+ P P+ T S
Sbjct: 124 TP-----SPTPTPSPTPTPSPTPSPTPSPTPTPSPTP-----SPTPTPSPTPSPTPTPSP 173
Query: 758 ASLVAPNPSITPTQAPTP 705
P PS TP +P+P
Sbjct: 174 TPSPTPPPSPTPPPSPSP 191
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/116 (38%), Positives = 61/116 (51%), Gaps = 4/116 (3%)
Frame = -3
Query: 1127 ISTSPSSPPSISRTSTGKPA---TSSRTSSSGSTPTAVSPPNPTTPATPPPSGT-SVSPS 960
+S +P+ P++S T + P T S T S TP+ P PT TP P+ T S +P+
Sbjct: 77 LSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPT 136
Query: 959 LSLTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSSAPP 792
S TPS TP SP+ + +P P P PS PS + +P+ T S PP S P S P
Sbjct: 137 PSPTPSPTP-SPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPPPSPSP 191
Score = 67.8 bits (164), Expect = 3e-10
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = -3
Query: 1127 ISTSPSSPPSISRTSTGKPA---TSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVSPSL 957
+S +PS P+ S T + P+ T S T S TP+ P PT TP PS T SP+
Sbjct: 87 LSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTP-SPTP 145
Query: 956 SLTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSSAPPAAPTA 777
S TP TP SP+ S TP P P+P+ PS + SPT S PP S SP P P++
Sbjct: 146 SPTP--TP-SPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPPPSP-SPLGDPMYFPSS 201
Query: 776 RSTS 765
T+
Sbjct: 202 VGTT 205
Score = 58.5 bits (140), Expect = 2e-07
Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGT-------SVS 966
S +P+ P+ S T T P T S T + TPT P+PT TP PS T S +
Sbjct: 106 SPTPTPSPTPSPTPTPSP-TPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPT 164
Query: 965 PSLSLTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMI 831
PS + TPS TP SP+ +P PP P+P P S TT +
Sbjct: 165 PSPTPTPSPTP-SPTPPPSPTPPPSPSPLGDPMYFPSSVGTTDQL 208
Score = 41.6 bits (96), Expect = 0.025
Identities = 26/80 (32%), Positives = 32/80 (39%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGY 565
P P P PS P+P P P+ PS TP+PS + P+P S S
Sbjct: 133 PTPTPSPTPSPTPSPTPTPSPTPS------PTPTPSPTPSPTPTPSPTPSPTPPP----- 181
Query: 564 YPGYYSGAPPPPPPPRPFFD 505
+P PPP P P D
Sbjct: 182 -------SPTPPPSPSPLGD 194
Score = 41.6 bits (96), Expect = 0.025
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGY 565
P P P PS P+P P P+ PS TPSP+ + P+P + S T S T
Sbjct: 93 PTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTP-TPSPTPSPTPSPTPTP 151
Query: 564 YPGYYSGAPPPPPPPRP 514
P + +P P P P P
Sbjct: 152 SP---TPSPTPTPSPTP 165
Score = 40.4 bits (93), Expect = 0.056
Identities = 27/78 (34%), Positives = 34/78 (42%), Gaps = 1/78 (1%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPY-SSSYTSYAADSYTGG 568
P P P P+ P P P P+ P+ TPSP+ S PSP + S T S T
Sbjct: 51 PSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPT 110
Query: 567 YYPGYYSGAPPPPPPPRP 514
P + +P P P P P
Sbjct: 111 PSP---TPSPTPTPSPTP 125
Score = 38.1 bits (87), Expect = 0.28
Identities = 24/77 (31%), Positives = 34/77 (43%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGY 565
P P P P+ +P P P P P+ TP+P+ S P+P S + + + + T
Sbjct: 41 PTPSPTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTP-SPTLSPTPSPTPTPSP 99
Query: 564 YPGYYSGAPPPPPPPRP 514
P S P P P P P
Sbjct: 100 TP---SPTPSPTPTPSP 113
Score = 33.5 bits (75), Expect = 6.9
Identities = 28/91 (30%), Positives = 30/91 (32%)
Frame = -1
Query: 961 PSLSPHH*LLSHPRDLPLQTLRYPQTPRRHRPPPPRRPPRPP*FLQHPQIHPPPPLRPPP 782
PS +P P P T TP P P P P P P P P P
Sbjct: 105 PSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPSPTPS-----PTPTPSPTPSPTP 159
Query: 781 RQDPPQARPPWSPPTPRLPQPKLQPQP*P*P 689
P + P PTP P P P P P P
Sbjct: 160 TPSPTPSPTPTPSPTPS-PTPPPSPTPPPSP 189
>ref|ZP_00116439.1| hypothetical protein [Synechococcus sp. WH 8102]
Length = 1954
Score = 92.8 bits (229), Expect = 1e-17
Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 3/167 (1%)
Frame = -3
Query: 1145 LRRSRWISTSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVS 966
+R +++ S S S T T P+ + T + +TPT P PT TP PS T +
Sbjct: 1490 IRTPGFVAARSSGTTSDSTTPTPTPSVTP-TPTPSATPTPTPTPTPTPTPTPTPSATP-T 1547
Query: 965 PSLSLTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASAN-SPSSAPPA 789
PS S TP TP SPS + TP+P P P+ P+ + +P++T + P A+ SPS+ P
Sbjct: 1548 PSPSATP--TP-SPSATPTPSPSATPTPTPTPTPTPTPSATPTPSPSATPTPSPSATPTP 1604
Query: 788 APTARSTSSSASLVAPNPSITPTQAP--TPTLTLTLTVTLRSSITED 654
+P+A T S ++ P+PS TPT +P TPT + + T T S T D
Sbjct: 1605 SPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPD 1651
Score = 91.7 bits (226), Expect = 2e-17
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 10/174 (5%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPA-----TSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSV-SP 963
ST+P+ PS++ T T T + T + TP+A P+P+ TP PS T SP
Sbjct: 1507 STTPTPTPSVTPTPTPSATPTPTPTPTPTPTPTPTPSATPTPSPSATPTPSPSATPTPSP 1566
Query: 962 SLSLTPSLTPF---SPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASAN-SPSSAP 795
S + TP+ TP +PS + TP+P P PS + + SP++T + P A+ SPS+ P
Sbjct: 1567 SATPTPTPTPTPTPTPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATP 1626
Query: 794 PAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPN 633
+P+A T S ++ P+PS TP PTPT + L V + ++DI P+
Sbjct: 1627 TPSPSATPTPSPSATPTPSPSATPD--PTPTASDELPVDVSDLGSDDISSLTPD 1678
Score = 87.4 bits (215), Expect = 4e-16
Identities = 67/180 (37%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Frame = -3
Query: 1091 RTSTGKPATSSRTSSSGSTPTAVSP--PNPTTPATPPPSGTSV-SPSLSLTPSLTPF-SP 924
RT A SS T+S +TPT P PT ATP P+ T +P+ + TPS TP SP
Sbjct: 1491 RTPGFVAARSSGTTSDSTTPTPTPSVTPTPTPSATPTPTPTPTPTPTPTPTPSATPTPSP 1550
Query: 923 SRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSSAPPAAPTARSTSSSASLVA 744
S + TP+P P PS PSA+ +PT T + P +PS+ P +P+A T S ++
Sbjct: 1551 SATPTPSPSATPTPS--PSATPTPTPTPTPTP-----TPSATPTPSPSATPTPSPSATPT 1603
Query: 743 PNPSITPTQAP--TPTLTLTLTVTLRSSITEDILHHLPNLNHLLLTLLPTPLTLLIPTPA 570
P+PS TPT +P TPT + + T T S T PTP PTP+
Sbjct: 1604 PSPSATPTPSPSATPTPSPSATPTPSPSAT------------------PTPSPSATPTPS 1645
Score = 65.1 bits (157), Expect = 2e-09
Identities = 45/139 (32%), Positives = 65/139 (46%)
Frame = -3
Query: 980 GTSVSPSLSLTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSS 801
GT +P S S S + TP P + P P+ PSA+ +PT T + P + +PS+
Sbjct: 1488 GTIRTPGFVAARSSGTTSDSTTPTPTPSVTPTPT--PSATPTPTPTPTPTPTPTP-TPSA 1544
Query: 800 APPAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPNLNHL 621
P +P+A T S ++ P+PS TPT PTPT T T + T S +
Sbjct: 1545 TPTPSPSATPTPSPSATPTPSPSATPTPTPTPTPTPTPSATPTPSPS------------- 1591
Query: 620 LLTLLPTPLTLLIPTPAVT 564
T P+P P+P+ T
Sbjct: 1592 -ATPTPSPSATPTPSPSAT 1609
Score = 42.4 bits (98), Expect = 0.015
Identities = 30/108 (27%), Positives = 39/108 (35%)
Frame = -3
Query: 887 NPSSPPSASSSPTSTTSMIPPASANSPSSAPPAAPTARSTSSSASLVAPNPSITPTQAPT 708
N + S T + S+ + S + PT T + P P+ TPT PT
Sbjct: 1478 NGKNDESDDQGTIRTPGFVAARSSGTTSDSTTPTPTPSVTPTPTPSATPTPTPTPTPTPT 1537
Query: 707 PTLTLTLTVTLRSSITEDILHHLPNLNHLLLTLLPTPLTLLIPTPAVT 564
PT T + T T S T T PTP PTP+ T
Sbjct: 1538 PTPTPSATPTPSPSATPTPSPSATPTPSPSATPTPTPTPTPTPTPSAT 1585
Score = 37.0 bits (84), Expect = 0.62
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAA 586
P P P PS + P P+P+ P+ TPSPS + PSP ++ S +A
Sbjct: 1596 PSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSA 1648
Score = 36.2 bits (82), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (51%)
Frame = -2
Query: 744 PQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSS 607
P P P PS + P P+P+ P+ TPSPS + P+P +S
Sbjct: 1612 PSPSATPTPSPSATPTPSPSATPTPSPSATPTPSPSATPDPTPTAS 1657
>gb|AAA59875.1| mucin
Length = 573
Score = 91.7 bits (226), Expect = 2e-17
Identities = 66/203 (32%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATP------PPSGTSVSP 963
+T+PS PP+ ++T P T T+ S T T +PP TTP+ P PP T+ SP
Sbjct: 61 TTTPSPPPT---STTTLPPT---TTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSP 114
Query: 962 SLSLT----PSLTPFSPSR-----SSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANS 810
+S T P+ TP P+ ++TP+PP + PP+ + SP +TT + PPAS +
Sbjct: 115 PISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTT 174
Query: 809 -PSSAPPAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPN 633
P + P+ PT +T+ + P+ TP PT T TL T T T
Sbjct: 175 LPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT 234
Query: 632 LNHLLLTLLPTPLTLLIPTPAVT 564
T P+P T+ TP T
Sbjct: 235 TPSPPTTTTPSPPTITTTTPPPT 257
Score = 90.1 bits (222), Expect = 6e-17
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Frame = -3
Query: 1124 STSPSSPPSISRT----STGKPATSSR----TSSSGSTPTAVSPPNPTTPATPPPSGTSV 969
+T+PS P + + T +T P T++ TS++ PT P PTT TPPP+ T+
Sbjct: 178 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPT-TTP 236
Query: 968 SPSLSLTPS---LTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANS--PS 804
SP + TPS +T +P ++TP+PP + PP+ + SP +TT + PP S + P+
Sbjct: 237 SPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 296
Query: 803 SAPPAAPTA------RSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLR-SSITEDILH 645
+ P PT +T S + P+P IT T P PT T + +T S T +
Sbjct: 297 TTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTT 356
Query: 644 HLPNLN-HLLLTLLPTPLTLLIPTPAVTIPVT 552
P +T TP + P+P T T
Sbjct: 357 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTT 388
Score = 89.0 bits (219), Expect = 1e-16
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSP-PNPTTPATPPPSGTSVSPSLSLT 948
+T+P +PP+ + T S T+++ + P +P P TTP TPP S T++ P+ + +
Sbjct: 162 TTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 221
Query: 947 ----------PSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPP--ASANSPS 804
P+ TP SP ++TP+PP + PP+ + SP +TT+ PP + + P+
Sbjct: 222 PPPTTTTTPPPTTTP-SPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPT 280
Query: 803 SAPPAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPNLNH 624
+ P PT+ +T + +P P+ T T PT T + T T IT
Sbjct: 281 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPS 340
Query: 623 LLLTLLPTPLTLLIPTPAVT 564
+T P+P T + TP+ T
Sbjct: 341 SPITTTPSPPTTTMTTPSPT 360
Score = 85.5 bits (210), Expect = 2e-15
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Frame = -3
Query: 1124 STSPSSPPSISRTS--TGKPATSSRTSSSGSTPTAVSPPNPTTPATP------------- 990
+T+PS PP+ + T T P+ + T+ S T T +PP TTP+ P
Sbjct: 217 TTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTP 276
Query: 989 -PPSGTSVSPSLSLT---PSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPP- 825
PP+ T ++P S T P+ TP SP ++T PP PS P + + SP TT+ PP
Sbjct: 277 SPPTTTPITPPTSTTTLPPTTTP-SPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 335
Query: 824 -ASANSPSSAPPAAPTA-------RSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRS 669
+ +SP + P+ PT +T SS PS T T +P PT T + T
Sbjct: 336 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP 395
Query: 668 SITEDILHHLPNLNHLLLTLLPTPLTLLIPTPAVTIP 558
S + LP T +PLT P++T P
Sbjct: 396 SPPTTTMTTLPP------TTTSSPLTTTPLPPSITPP 426
Score = 85.5 bits (210), Expect = 2e-15
Identities = 70/200 (35%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Frame = -3
Query: 1121 TSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVSPSLSLT-- 948
T+PS P T+T P +S T+ P +P PTT T PP T+ SP ++ T
Sbjct: 55 TTPSPP-----TTTPSPPPTSTTT----LPPTTTPSPPTTTTTTPPPTTTPSPPITTTTT 105
Query: 947 --PSLTPFSP-SRSSTPNP---PIPP--NPSSPPSASSSPTSTTSMIPPASANSPSSAPP 792
P+ TP P S ++TP P P PP PS P + S PT+TT+ PP + SP + P
Sbjct: 106 PPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 165
Query: 791 AAPTARSTSSSASLVAPNPSITPTQAPTPTLT----LTLTVTLRSSITEDILHHLPNLNH 624
P A ST++ P+P T T P PT T T +T +S T LP
Sbjct: 166 ITPPA-STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT-----LPPTT- 218
Query: 623 LLLTLLPTPLTLLIPTPAVT 564
T P P T P P T
Sbjct: 219 ---TPSPPPTTTTTPPPTTT 235
Score = 83.6 bits (205), Expect = 6e-15
Identities = 60/195 (30%), Positives = 86/195 (43%), Gaps = 7/195 (3%)
Frame = -3
Query: 1127 ISTSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVSPSLSLT 948
IST+ + PP+ + + + T+ S T T +PP TTP+ PP+ T ++P S T
Sbjct: 116 ISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPS--PPTTTPITPPASTT 173
Query: 947 ---PSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANSPSSAPPAAPTA 777
P+ TP SP ++T PP PS P + +P ++T+ +PP + SP P
Sbjct: 174 TLPPTTTP-SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 232
Query: 776 RSTSSSASLVAPNPSITPTQAPTPTLT----LTLTVTLRSSITEDILHHLPNLNHLLLTL 609
+T S + P+P T P PT T T T T + T P T
Sbjct: 233 TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 292
Query: 608 LPTPLTLLIPTPAVT 564
LP P T P P T
Sbjct: 293 LP-PTTTPSPPPTTT 306
Score = 82.8 bits (203), Expect = 1e-14
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPATSSRTSSSGSTP--TAVSPPNPTTPATPPPSGTSVSPSLS- 954
+T+PS P IS T+T P T+ ++ +P T SPP TT TPPP+ T P+ +
Sbjct: 109 TTTPSPP--ISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTT-TTPPPTTTPSPPTTTP 165
Query: 953 LTPSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTSTTSMIPPASANS--PSSAPPAAPT 780
+TP + + ++TP+PP + PP+ + SP +TT + PP S + P++ P PT
Sbjct: 166 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 225
Query: 779 ARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPNLNHLLLTLLPT 600
+T + +P P+ T PT T T T S T T T
Sbjct: 226 TTTTPPPTTTPSP-PTTTTPSPPTITTTTPPPTTTPSPPT---------------TTTTT 269
Query: 599 PLTLLIPTPAVTIPVT 552
P P+P T P+T
Sbjct: 270 PPPTTTPSPPTTTPIT 285
Score = 82.8 bits (203), Expect = 1e-14
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Frame = -3
Query: 1124 STSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPNP--TTPATPPPSGTSVSPSLSL 951
+T+ SPP+I+ T+ T S +++ +TP + P+P TTP TPP S T++ P+ +
Sbjct: 240 TTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 299
Query: 950 TP----------SLTPFSPSRSSTPNPPIPPNPSSPPSAS-SSPTSTTSMIPPASANSPS 804
+P + TP SP ++TP+PPI + PP+ + SSP +TT P + +PS
Sbjct: 300 SPPPTTTTTPPPTTTP-SPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS 358
Query: 803 SAPPAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLTLTVTLRSSITEDILHHLPNLNH 624
P P++ T+++ PS PT TP+ T T S T + P
Sbjct: 359 --PTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPT-----TTPSPPTTTMTTLPPTTTS 411
Query: 623 LLLTLLPTPLTLLIPT 576
LT P P ++ PT
Sbjct: 412 SPLTTTPLPPSITPPT 427
Score = 81.3 bits (199), Expect = 3e-14
Identities = 54/166 (32%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Frame = -3
Query: 1040 STPTAVSPPNPTTPATPPPSGTSVSPSLSLT---PSLTPFSPSRSSTPNPPIPPNPSSPP 870
S PT P PT+ T PP+ T P+ + T P+ TP SP ++T PP PS P
Sbjct: 58 SPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTP-SPPITTTTTPPPTTTPSPPI 116
Query: 869 SASSSPTSTTSMIPPASANSPSSAPPAAPTARSTSSSASLVAPNPSITPTQAPTPTLTLT 690
S +++P TT+ PP + SP + P+ PT +T+ + P+ TP P T TL
Sbjct: 117 STTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLP 176
Query: 689 LTVTLRSSITEDILHHLPNLNHLLLTLLPTPLTLLIPTPAVTIPVT 552
T T T T P P T P+P T P+T
Sbjct: 177 PTTTPSPPTT--------------TTTTPPPTT--TPSPPTTTPIT 206
Score = 75.5 bits (184), Expect = 2e-12
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Frame = -3
Query: 1124 STSPSSPPSISRTS--TGKPATSSRTSSSGSTPTAVSPPNPTTPATP------PPSGTSV 969
+T+PS PP+ + T T P+ + T+ S T +PP TTP++P PP+ T
Sbjct: 296 TTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMT 355
Query: 968 SPSLSLTPS---LTPFSPSRSSTPNPP--IPPNPSSPPSASSSPTSTTSMIPPASANSPS 804
+PS + TPS T +PS ++TP+PP P SP + S PT+T + +PP + +SP
Sbjct: 356 TPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTP-SPTTTPSPPTTTMTTLPPTTTSSPL 414
Query: 803 SAPPAAPTARSTSSSASLVAPNPSITPTQAPTPT 702
+ P P+ + P P+ +P TPT
Sbjct: 415 TTTPLPPS----------ITP-PTFSPFSTTTPT 437
Score = 52.4 bits (124), Expect = 1e-05
Identities = 33/98 (33%), Positives = 57/98 (57%), Gaps = 4/98 (4%)
Frame = -3
Query: 1127 ISTSPSSPPSISRTSTGKPATSSRTSSSGSTPTAVSPPN--PTTPATPPPSGTSVSPSLS 954
I+T+PS PP+ + T+ T S ++ +TP++ + P+ PTT TP P+ T P+ +
Sbjct: 343 ITTTPS-PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTT 401
Query: 953 LT--PSLTPFSPSRSSTPNPPIPPNPSSPPSASSSPTS 846
+T P T SP ++TP PP P+ P ++++PT+
Sbjct: 402 MTTLPPTTTSSP-LTTTPLPPSITPPTFSPFSTTTPTT 438
Score = 50.8 bits (120), Expect = 4e-05
Identities = 31/83 (37%), Positives = 44/83 (52%), Gaps = 4/83 (4%)
Frame = -3
Query: 1124 STSPSSPPSISRT--STGKPATSSRTSSSGSTPTAVSPPNPTTPATPPPSGTSVSPSLSL 951
+T+PSSP + + T ST P+ T ++ S T SPP T PP + +S + L
Sbjct: 360 TTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPL 419
Query: 950 TPSLTP--FSPSRSSTPNPPIPP 888
PS+TP FSP ++TP P P
Sbjct: 420 PPSITPPTFSPFSTTTPTTPCVP 442
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,290,632,547
Number of Sequences: 1393205
Number of extensions: 43783458
Number of successful extensions: 988647
Number of sequences better than 10.0: 20425
Number of HSP's better than 10.0 without gapping: 211555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567019
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 75223582428
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
