Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001505A_C01 KMC001505A_c01
(489 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565751.2| hypothetical protein; protein id: At2g32760.1, ... 82 1e-25
pir||T00792 hypothetical protein At2g32760 [imported] - Arabidop... 56 2e-10
gb|AAC04487.2| hypothetical protein [Arabidopsis thaliana] 56 2e-10
pir||T49517 p63 related protein [imported] - Neurospora crassa 30 0.009
gb|EAA34900.1| predicted protein [Neurospora crassa] 30 0.010
>ref|NP_565751.2| hypothetical protein; protein id: At2g32760.1, supported by cDNA:
gi_18700112 [Arabidopsis thaliana]
gi|18700113|gb|AAL77668.1| At2g32760/F24L7.10
[Arabidopsis thaliana]
Length = 352
Score = 81.6 bits (200), Expect(2) = 1e-25
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = -2
Query: 326 PFFLMVQTPPRAAYAVFLLNKDLEQLLNFIGAQSLGPRHVLANLRELLRTIQSSAYIDDL 147
P FL Q RAAYAVFLLNK++EQLLNF+G SLGPR VLANL+EL+R IQS YID L
Sbjct: 293 PLFLDGQDTTRAAYAVFLLNKNIEQLLNFVGENSLGPRQVLANLKELIRIIQSPDYIDYL 352
Score = 55.8 bits (133), Expect(2) = 1e-25
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3
Query: 487 SLVASYLQVPLRYPLRLGASRSHIIDNAPSVELTSSEASSSVMSFTNAKHVEFPLF 320
SL+A YL+VP+RYPL LG S+++I D AP +E + S+ S N VEFPLF
Sbjct: 240 SLIAPYLRVPIRYPLCLGGSKTYIRDYAPYIEPSPSDMSPITTLSQNINFVEFPLF 295
>pir||T00792 hypothetical protein At2g32760 [imported] - Arabidopsis thaliana
Length = 380
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3
Query: 487 SLVASYLQVPLRYPLRLGASRSHIIDNAPSVELTSSEASSSVMSFTNAKHVEFPLF 320
SL+A YL+VP+RYPL LG S+++I D AP +E + S+ S N VEFPLF
Sbjct: 164 SLIAPYLRVPIRYPLCLGGSKTYIRDYAPYIEPSPSDMSPITTLSQNINFVEFPLF 219
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -2
Query: 326 PFFLMVQTPPRAAYAVFLLNK 264
P FL Q RAAYAVFLLNK
Sbjct: 217 PLFLDGQDTTRAAYAVFLLNK 237
>gb|AAC04487.2| hypothetical protein [Arabidopsis thaliana]
Length = 293
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3
Query: 487 SLVASYLQVPLRYPLRLGASRSHIIDNAPSVELTSSEASSSVMSFTNAKHVEFPLF 320
SL+A YL+VP+RYPL LG S+++I D AP +E + S+ S N VEFPLF
Sbjct: 164 SLIAPYLRVPIRYPLCLGGSKTYIRDYAPYIEPSPSDMSPITTLSQNINFVEFPLF 219
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -2
Query: 326 PFFLMVQTPPRAAYAVFLLNK 264
P FL Q RAAYAVFLLNK
Sbjct: 217 PLFLDGQDTTRAAYAVFLLNK 237
>pir||T49517 p63 related protein [imported] - Neurospora crassa
Length = 1114
Score = 30.0 bits (66), Expect(2) = 0.009
Identities = 24/67 (35%), Positives = 29/67 (42%), Gaps = 16/67 (23%)
Frame = -3
Query: 472 YLQVPLRYPLRLGASRSHIIDNA------PSVELTSSEASSSVMSFTNAKHV-------- 335
YL VPL YP++ SRS I D+ P+ SS AS S S +
Sbjct: 828 YLSVPLPYPIKWHGSRSTIRDDISNFPMNPNASSYSSHASQSSRSASTNSPASLGEETDP 887
Query: 334 --EFPLF 320
EFPLF
Sbjct: 888 SREFPLF 894
Score = 29.6 bits (65), Expect(2) = 0.009
Identities = 17/38 (44%), Positives = 23/38 (59%)
Frame = -2
Query: 296 RAAYAVFLLNKDLEQLLNFIGAQSLGPRHVLANLRELL 183
R YA FLLN+++E L G + + RH L NL+ LL
Sbjct: 905 RFEYAWFLLNRNIEVLCWSQGLKVVDIRHTLPNLQWLL 942
>gb|EAA34900.1| predicted protein [Neurospora crassa]
Length = 731
Score = 30.0 bits (66), Expect(2) = 0.010
Identities = 24/67 (35%), Positives = 29/67 (42%), Gaps = 16/67 (23%)
Frame = -3
Query: 472 YLQVPLRYPLRLGASRSHIIDNA------PSVELTSSEASSSVMSFTNAKHV-------- 335
YL VPL YP++ SRS I D+ P+ SS AS S S +
Sbjct: 445 YLSVPLPYPIKWHGSRSTIRDDISNFPMNPNASSYSSHASQSSRSASTNSPASLGEETDP 504
Query: 334 --EFPLF 320
EFPLF
Sbjct: 505 SREFPLF 511
Score = 29.6 bits (65), Expect(2) = 0.010
Identities = 17/38 (44%), Positives = 23/38 (59%)
Frame = -2
Query: 296 RAAYAVFLLNKDLEQLLNFIGAQSLGPRHVLANLRELL 183
R YA FLLN+++E L G + + RH L NL+ LL
Sbjct: 522 RFEYAWFLLNRNIEVLCWSQGLKVVDIRHTLPNLQWLL 559
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 409,644,725
Number of Sequences: 1393205
Number of extensions: 8491953
Number of successful extensions: 19882
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19875
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
