KMC001503A_c14
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC001503A_C14 KMC001503A_c14
atcgataccataaacatgtcactgtcatacatgaaccatacatcactttccaccacagtc
ctcacatgcttctacacattAAGTTAACCTTCAAGATGCCAACACTAAGCTAGTACTAAA
TAATTTATTAAAGAAAGAAAAAACAAGTTACATCATAAGATTAAACTAAAAAGCAAAGCA
CCAAGGTGGTTCTCCCATCCCCATAAGCATCAGAATCTGCCAGCACTCATCAAAGCCTCT
GAGCTAGTAATAGTCTCAGGTCATTGACCCCACCCACACATCCAAACAGAACACTTTATG
TCTGCATAATATCTTACACATTTCTTCCTCAGAGAAGAAAATTCAAGCACAAAGCGTAGG
CAGGGAGCAACAATAATTAATTAAGCATCCTCATGGGTGCTGGGTTGGCAACATGGGCAC
TGGCTTTCTGGACTCTCACCGCTTTGGTGCCAGTGAGAGGGTTGTACTCAGAGAGCAAGG
TAATAGCTCTAGAAAACTCCTTGGAAGAAATAGTCCTGGGCTCTTGGGCCATTTTCTTCA
CATAAGGCTTGGTCCTCTGGGTCATTGGCTAGTTGGTGATCCACTAACAACAGGCCCTTG
TAGTCCAAGATGTTCCTGTAGTAGTTGTTGTCCAGAATCATGGGTGTGCCGCGGTCGTTC
CTCACGTACTGCACGGGCTTGGGATCAGGAATGGCATCAGGGCACTTCTTCAGCATGTGG
GGGATGTGGTCTGGATTCAAAGCTG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001503A_C14 KMC001503A_c14
         (745 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD37374.1|AF145348_1 peroxidase [Glycine max]                     132  5e-30
pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean gi|39...   132  5e-30
emb|CAB71128.2| cationic peroxidase [Cicer arietinum]                 128  1e-28
pir||T05478 peroxidase (EC 1.11.1.7) prxr1 - Arabidopsis thalian...   124  1e-27
ref|NP_567641.1| peroxidase, putative; protein id: At4g21960.1, ...   124  1e-27

>gb|AAD37374.1|AF145348_1 peroxidase [Glycine max]
          Length = 336

 Score =  132 bits (332), Expect = 5e-30
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = -3

Query: 743 ALNPDHIPHMLKKCPDAIPDPKPVQYVRNDRGTPMILDNNYYRNILDYKGLLLVDHQLAN 564
           ALNPDH+PH+LKKCPDAIPDPK VQYVRNDRGTPMILDNNYYRNILD KGLL+VDHQLAN
Sbjct: 220 ALNPDHVPHILKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDSKGLLIVDHQLAN 279

Query: 563 DPEDQALCEENGPRAQDYFFQ 501
           D   +   ++   ++QDYFF+
Sbjct: 280 DKRTKPYVKKMA-KSQDYFFK 299

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 34/52 (65%), Positives = 39/52 (74%)
 Frame = -1

Query: 559 QRTKPYVKKMAQEPRTISSKEFSRAITLLSEYNPLTGTKAVRVQKASAHVAN 404
           +RTKPYVKKMA+  +    KEFSRAITLLSE NPLTGTK   V+K   +VAN
Sbjct: 281 KRTKPYVKKMAKS-QDYFFKEFSRAITLLSENNPLTGTKG-EVRK-QCNVAN 329

>pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean
           gi|3982596|gb|AAC83463.1| cationic peroxidase 2 [Glycine
           max]
          Length = 331

 Score =  132 bits (332), Expect = 5e-30
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = -3

Query: 743 ALNPDHIPHMLKKCPDAIPDPKPVQYVRNDRGTPMILDNNYYRNILDYKGLLLVDHQLAN 564
           ALNPDH+PH+LKKCPDAIPDPK VQYVRNDRGTPMILDNNYYRNILD KGLL+VDHQLAN
Sbjct: 216 ALNPDHVPHILKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAN 275

Query: 563 DPEDQALCEENGPRAQDYFFQ 501
           D   +   ++   ++QDYFF+
Sbjct: 276 DKRTKPYVKKMA-KSQDYFFK 295

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 33/56 (58%), Positives = 40/56 (70%), Gaps = 1/56 (1%)
 Frame = -1

Query: 559 QRTKPYVKKMAQEPRTISSKEFSRAITLLSEYNPLTGTKA-VRVQKASAHVANPAP 395
           +RTKPYVKKMA+  +    KEFSRAITLLSE NPLTGTK  +R Q  +A+  +  P
Sbjct: 277 KRTKPYVKKMAKS-QDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNAANKHHEEP 331

>emb|CAB71128.2| cationic peroxidase [Cicer arietinum]
          Length = 336

 Score =  128 bits (321), Expect = 1e-28
 Identities = 60/81 (74%), Positives = 69/81 (85%)
 Frame = -3

Query: 743 ALNPDHIPHMLKKCPDAIPDPKPVQYVRNDRGTPMILDNNYYRNILDYKGLLLVDHQLAN 564
           ALNP+HIPHMLKKCPD+IPDPK VQYVRNDRGTPMILDNNYYRNILD KGLL VDHQLA+
Sbjct: 219 ALNPEHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLSVDHQLAH 278

Query: 563 DPEDQALCEENGPRAQDYFFQ 501
           D   +   ++   ++QDYFF+
Sbjct: 279 DKRTKPYVKKMA-KSQDYFFK 298

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 32/39 (81%)
 Frame = -1

Query: 559 QRTKPYVKKMAQEPRTISSKEFSRAITLLSEYNPLTGTK 443
           +RTKPYVKKMA+  +    KEFSRAITLLSE NPLTGTK
Sbjct: 280 KRTKPYVKKMAKS-QDYFFKEFSRAITLLSENNPLTGTK 317

>pir||T05478 peroxidase (EC 1.11.1.7) prxr1 - Arabidopsis thaliana
           gi|2894574|emb|CAA17163.1| peroxidase prxr1 [Arabidopsis
           thaliana] gi|7269041|emb|CAB79151.1| peroxidase prxr1
           [Arabidopsis thaliana]
          Length = 323

 Score =  124 bits (312), Expect = 1e-27
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = -3

Query: 743 ALNPDHIPHMLKKCPDAIPDPKPVQYVRNDRGTPMILDNNYYRNILDYKGLLLVDHQLAN 564
           +LNPDH+PHML KCPD+IPDPK VQYVRNDRGTPM+LDNNYYRNILD KGLLLVDHQLA+
Sbjct: 211 SLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAH 270

Query: 563 DPEDQALCEENGPRAQDYFFQ 501
           D   + + ++   + Q YFF+
Sbjct: 271 DKRTRPIVKKMA-KDQAYFFK 290

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 23/39 (58%), Positives = 31/39 (78%)
 Frame = -1

Query: 559 QRTKPYVKKMAQEPRTISSKEFSRAITLLSEYNPLTGTK 443
           +RT+P VKKMA++ +    KEF+RAI +LSE NPLTG+K
Sbjct: 272 KRTRPIVKKMAKD-QAYFFKEFTRAIQILSENNPLTGSK 309

>ref|NP_567641.1| peroxidase, putative; protein id: At4g21960.1, supported by cDNA:
           20758., supported by cDNA: gi_13358206, supported by
           cDNA: gi_15983806, supported by cDNA: gi_16226364,
           supported by cDNA: gi_16604345, supported by cDNA:
           gi_16648880 [Arabidopsis thaliana]
           gi|26397890|sp|Q9SB81|PE42_ARATH Peroxidase 42 precursor
           (Atperox P42) (PRXR1) (ATP1a/ATP1b)
           gi|1402904|emb|CAA66957.1| peroxidase [Arabidopsis
           thaliana] gi|11762178|gb|AAG40367.1|AF325015_1 AT4g21960
           [Arabidopsis thaliana] gi|15983807|gb|AAL10500.1|
           AT4g21960/T8O5_170 [Arabidopsis thaliana]
           gi|16226365|gb|AAL16147.1|AF428379_1 AT4g21960/T8O5_170
           [Arabidopsis thaliana] gi|16604346|gb|AAL24179.1|
           AT4g21960/T8O5_170 [Arabidopsis thaliana]
           gi|16648881|gb|AAL24292.1| peroxidase prxr1 [Arabidopsis
           thaliana] gi|22135771|gb|AAM91042.1| AT4g21960/T8O5_170
           [Arabidopsis thaliana]
          Length = 330

 Score =  124 bits (312), Expect = 1e-27
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = -3

Query: 743 ALNPDHIPHMLKKCPDAIPDPKPVQYVRNDRGTPMILDNNYYRNILDYKGLLLVDHQLAN 564
           +LNPDH+PHML KCPD+IPDPK VQYVRNDRGTPM+LDNNYYRNILD KGLLLVDHQLA+
Sbjct: 218 SLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAH 277

Query: 563 DPEDQALCEENGPRAQDYFFQ 501
           D   + + ++   + Q YFF+
Sbjct: 278 DKRTRPIVKKMA-KDQAYFFK 297

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 23/39 (58%), Positives = 31/39 (78%)
 Frame = -1

Query: 559 QRTKPYVKKMAQEPRTISSKEFSRAITLLSEYNPLTGTK 443
           +RT+P VKKMA++ +    KEF+RAI +LSE NPLTG+K
Sbjct: 279 KRTRPIVKKMAKD-QAYFFKEFTRAIQILSENNPLTGSK 316

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 699,827,390
Number of Sequences: 1393205
Number of extensions: 16111296
Number of successful extensions: 44964
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 41623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44837
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 35751090169
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MFB095g01_f BP040944 1 556
2 SPDL094c01_f BP057892 66 768
3 MFB091b06_f BP040628 69 473
4 SPD053b01_f BP048206 69 425
5 SPD059f03_f BP048706 72 796
6 GNf072c04 BP072684 80 771
7 MF050b12_f BP030915 86 684
8 SPDL006d11_f BP052349 93 784
9 SPD079h02_f BP050351 93 821
10 MPD036c01_f AV772448 93 632
11 MPD027b08_f AV771829 93 778
12 MPD034e11_f AV772339 94 704
13 MPD009d09_f AV770591 94 717
14 SPD052d12_f BP048151 99 807
15 MPD001a05_f AV770041 99 225
16 MF041g07_f BP030461 100 768
17 MR082f02_f BP082322 100 514
18 MPD072e08_f AV774728 101 254
19 GENf034h09 BP059822 101 711
20 MFB035d08_f BP036566 102 768
21 MR062c12_f BP080743 102 531
22 SPD029d08_f BP046297 104 774
23 MPD065c09_f AV774324 106 714
24 GENf097f10 BP062321 110 759
25 GENf054a11 BP060640 110 478
26 MWM039b11_f AV765281 110 721
27 MPD097e12_f AV776356 111 718
28 GNf094e11 BP074340 111 663
29 GENf031d08 BP059666 111 589
30 MF081d12_f BP032570 111 768
31 MFB036d12_f BP036638 111 606
32 GNf020e10 BP068830 111 734
33 SPD057a09_f BP048504 111 768
34 GENf052b02 BP060553 111 594
35 MPDL061h06_f AV779625 111 704
36 GENf052d03 BP060562 111 582
37 MR029h09_f BP078275 111 799
38 SPD063d02_f BP049017 111 663
39 GENf032d07 BP059706 111 718
40 GENf060c01 BP060889 111 467
41 SPD023g01_f BP045840 111 475
42 GNf088g02 BP073889 111 713
43 MPD079a03_f AV775153 111 703
44 MR096a07_f BP083333 111 755
45 MPD063h08_f AV774233 111 654
46 GNf013d10 BP068312 111 545
47 MR049b06_f BP079768 111 718
48 MPD011c05_f AV770719 111 747
49 MPD060e10_f AV774027 111 663
50 MPD077c10_f AV775051 111 703
51 MPD035f02_f AV772413 111 758
52 MFB060h11_f BP038393 111 758
53 MPD043b08_f AV772911 111 749
54 MF099c06_f BP033442 111 786
55 GNf044d06 BP070603 111 610
56 MF028g01_f BP029756 111 715
57 MPD006g06_f AV770422 111 720
58 MFB030f07_f BP036210 111 715
59 MFB058h11_f BP038239 111 821
60 GNf031f09 BP069637 111 672
61 GENf057b09 BP060770 111 545
62 GENf060d03 BP060896 111 448
63 GENf017g09 BP059099 111 717
64 GENf025g11 BP059410 111 577
65 GENf064f08 BP061097 111 568
66 MWM056b04_f AV765574 111 479
67 GENf002b08 BP058384 111 664
68 GNf100f11 BP074802 111 610
69 GENf076a03 BP061594 111 610
70 MR021c03_f BP077583 111 629
71 GENf075c08 BP061557 111 533
72 MR030f03_f BP078319 111 628
73 MWM061b01_f AV765658 111 621
74 MPD032h09_f AV772225 112 750
75 MR044d01_f BP079397 112 771
76 MR007f03_f BP076493 112 621
77 MFB042a08_f BP037034 112 791
78 MPD053a10_f AV773546 112 713
79 GENf025f08 BP059405 112 592
80 MPD018a11_f AV771212 112 732
81 MR084c12_f BP082458 112 595
82 MPD058h11_f AV773920 113 769
83 MPD012b04_f AV770786 113 754
84 MR049b03_f BP079765 113 314
85 MPD076h05_f AV775020 113 791
86 MPD013d02_f AV770882 113 239
87 GENf013c06 BP058886 114 290
88 SPD100f12_f BP052001 114 340
89 MFB061g01_f BP038453 114 768
90 GNf002a08 BP067488 114 774
91 MFBL048b12_f BP043700 114 698
92 GENf061c07 BP060945 114 732
93 GENf016d03 BP059035 114 783
94 SPD068e05_f BP049438 114 767
95 MF012d04_f BP028863 114 774
96 SPD026g01_f BP046079 114 771
97 MR071c02_f BP081442 115 607
98 MR076h08_f BP081888 115 602
99 MFB074f08_f BP039404 115 687
100 SPD034e08_f BP046711 115 659
101 MPD082d07_f AV775381 115 691
102 MFB011h11_f BP034755 115 715
103 MR060h10_f BP080639 115 695
104 MF058h08_f BP031385 117 793
105 GENf031a02 BP059641 117 557
106 GNf062f10 BP071997 117 663
107 MR029a08_f BP078207 117 434
108 GENf068f01 BP061276 117 557
109 MPD032a08_f AV772163 117 747
110 MR082e07_f BP082316 117 605
111 MF070a03_f BP031989 117 713
112 SPD024e09_f BP045903 117 765
113 MF053h07_f BP031114 117 195
114 MFB012b07_f BP034774 117 800
115 SPD036h01_f BP046900 117 793
116 SPD064d02_f BP049098 117 659
117 MFB085e07_f BP040217 117 564
118 MF087a05_f BP032852 117 663
119 MF049f11_f BP030885 117 423
120 MFB062g05_f BP038522 117 775
121 GNf073c06 BP072759 117 461
122 SPD022g10_f BP045766 117 745
123 GNf047c04 BP070824 117 633
124 MF021h04_f BP029398 117 384
125 MF019f01_f BP029265 117 716
126 MFB058b05_f BP038178 117 796
127 MFB027h08_f BP036003 117 633
128 MR071h01_f BP081492 117 607
129 GENf006h05 BP058602 117 691
130 GENf045g04 BP060268 117 710
131 MPD049a07_f AV773290 117 717
132 GNf089g07 BP073961 117 608
133 MFB040h05_f BP036946 118 715
134 SPD002d02_f BP044154 118 723
135 MFB038f02_f BP036798 120 798
136 SPD031e01_f BP046466 120 562
137 SPD086f05_f BP050883 122 779
138 MF053b01_f BP031067 122 745
139 MF004c10_f BP028437 122 758
140 MFB074h01_f BP039419 122 784
141 MF020e04_f BP029324 123 801
142 MFB074h04_f BP039420 123 821
143 MPDL026h08_f AV777826 123 427
144 MFB002d01_f BP034034 123 597
145 MWM176a11_f AV767434 124 453
146 MFB026e10_f BP035898 125 629
147 SPD073f04_f BP049849 126 679
148 MF038c01_f BP030276 126 765
149 GNf084d02 BP073554 126 800
150 SPD054c09_f BP048295 126 768
151 SPD042h08_f BP047386 126 770
152 GNf028b12 BP069371 127 499
153 SPD057h11_f BP048576 127 656
154 MPD032a02_f AV772160 127 717
155 MF099e07_f BP033456 129 818
156 MFB021b07_f BP035477 130 794
157 MFB057h01_f BP038154 133 770
158 SPD076a01_f BP050040 133 849
159 MFB037b06_f BP036685 136 745
160 GNf060h04 BP071863 136 746
161 SPDL100f09_f BP058312 136 796
162 GENf048b12 BP060368 136 618
163 MR004g02_f BP076259 136 664
164 MR021e05_f BP077602 138 633
165 MPD062e06_f AV774145 138 718
166 MPD095e04_f AV776223 140 705
167 MPD083a07_f AV775422 140 724
168 MF082b09_f BP032605 142 795
169 GNf067h03 BP072368 143 540
170 MF065h04_f BP031782 144 783
171 SPD063b09_f BP049004 145 782
172 SPDL046b06_f BP054861 147 593
173 MPD074f04_f AV774866 149 809
174 MR088e11_f BP082772 150 628
175 GNf002h06 BP067547 152 698
176 MPD061b02_f AV774066 160 693
177 MFB058b12_f BP038184 160 777
178 MFB057f11_f BP038144 175 868
179 GNf001h05 BP067476 200 716




Lotus japonicus
Kazusa DNA Research Institute