Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001501A_C01 KMC001501A_c01
(522 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565437.1| expressed protein; protein id: At2g18360.1, sup... 167 5e-41
gb|AAM65281.1| putative hydrolase [Arabidopsis thaliana] 164 4e-40
ref|NP_195379.1| putative protein; protein id: At4g36610.1, supp... 164 4e-40
pir||D84563 hypothetical protein At2g18360 [imported] - Arabidop... 157 5e-38
gb|AAL87168.1|AF480496_22 putative hydrolase [Oryza sativa (japo... 146 2e-34
>ref|NP_565437.1| expressed protein; protein id: At2g18360.1, supported by cDNA:
gi_13605610 [Arabidopsis thaliana]
gi|13605611|gb|AAK32799.1|AF361631_1 At2g18360/T30D6.13
[Arabidopsis thaliana] gi|20197805|gb|AAD15501.2|
expressed protein [Arabidopsis thaliana]
gi|21360541|gb|AAM47467.1| At2g18360/T30D6.13
[Arabidopsis thaliana]
Length = 313
Score = 167 bits (424), Expect = 5e-41
Identities = 77/109 (70%), Positives = 92/109 (83%)
Frame = -3
Query: 520 SVAAHKKLWFPNRLHKDFLEVMFTNRKERGELLEGLVISNKDVNIPNFPQRIHLLWGETD 341
++A HK +WFP RL KDF+EVM TNRKER ELLE LVISNKDV IP F Q+IHLLWGE+D
Sbjct: 200 TLAVHKPMWFPKRLFKDFIEVMITNRKERAELLEALVISNKDVTIPRFQQKIHLLWGESD 259
Query: 340 QIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQFIAS 194
QIF +E A++MKE+LG+ A+ + IKKAGHL HLERPCVYNR LK+F+AS
Sbjct: 260 QIFNLEFAKSMKEQLGENATMESIKKAGHLAHLERPCVYNRRLKKFLAS 308
>gb|AAM65281.1| putative hydrolase [Arabidopsis thaliana]
Length = 317
Score = 164 bits (416), Expect = 4e-40
Identities = 76/119 (63%), Positives = 98/119 (81%)
Frame = -3
Query: 520 SVAAHKKLWFPNRLHKDFLEVMFTNRKERGELLEGLVISNKDVNIPNFPQRIHLLWGETD 341
++A HK LWFP RL KD++EVMF NRKER ELLE +V+SNK+ IP+FP++IH LWGE+D
Sbjct: 198 TIAVHKPLWFPKRLFKDYIEVMFNNRKERAELLEAVVVSNKEAQIPHFPRKIHFLWGESD 257
Query: 340 QIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQFIASFLASINEDKI 164
QIF +ELA++MKE++G+ A+ + IKKAGHLV LERPCVYNR LK+F+AS +EDKI
Sbjct: 258 QIFDLELARDMKEQIGENATIESIKKAGHLVQLERPCVYNRRLKKFLASI---HSEDKI 313
>ref|NP_195379.1| putative protein; protein id: At4g36610.1, supported by cDNA:
38141. [Arabidopsis thaliana] gi|25407745|pir||C85432
hypothetical protein AT4g36610 [imported] - Arabidopsis
thaliana gi|4006902|emb|CAB16832.1| putative protein
[Arabidopsis thaliana] gi|7270609|emb|CAB80327.1|
putative protein [Arabidopsis thaliana]
Length = 317
Score = 164 bits (416), Expect = 4e-40
Identities = 76/119 (63%), Positives = 98/119 (81%)
Frame = -3
Query: 520 SVAAHKKLWFPNRLHKDFLEVMFTNRKERGELLEGLVISNKDVNIPNFPQRIHLLWGETD 341
++A HK LWFP RL KD++EVMF NRKER ELLE +V+SNK+ IP+FP++IH LWGE+D
Sbjct: 198 TIAVHKPLWFPKRLFKDYIEVMFNNRKERAELLEAVVVSNKEAQIPHFPRKIHFLWGESD 257
Query: 340 QIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQFIASFLASINEDKI 164
QIF +ELA++MKE++G+ A+ + IKKAGHLV LERPCVYNR LK+F+AS +EDKI
Sbjct: 258 QIFDLELARDMKEQIGENATIESIKKAGHLVQLERPCVYNRRLKKFLASI---HSEDKI 313
>pir||D84563 hypothetical protein At2g18360 [imported] - Arabidopsis thaliana
Length = 328
Score = 157 bits (398), Expect = 5e-38
Identities = 77/124 (62%), Positives = 92/124 (74%), Gaps = 15/124 (12%)
Frame = -3
Query: 520 SVAAHKKLWFPNRLHKDFLE---------------VMFTNRKERGELLEGLVISNKDVNI 386
++A HK +WFP RL KDF+E VM TNRKER ELLE LVISNKDV I
Sbjct: 200 TLAVHKPMWFPKRLFKDFIEFGRAVVIYILLQNVKVMITNRKERAELLEALVISNKDVTI 259
Query: 385 PNFPQRIHLLWGETDQIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQ 206
P F Q+IHLLWGE+DQIF +E A++MKE+LG+ A+ + IKKAGHL HLERPCVYNR LK+
Sbjct: 260 PRFQQKIHLLWGESDQIFNLEFAKSMKEQLGENATMESIKKAGHLAHLERPCVYNRRLKK 319
Query: 205 FIAS 194
F+AS
Sbjct: 320 FLAS 323
>gb|AAL87168.1|AF480496_22 putative hydrolase [Oryza sativa (japonica cultivar-group)]
Length = 339
Score = 146 bits (368), Expect = 2e-34
Identities = 63/108 (58%), Positives = 85/108 (78%)
Frame = -3
Query: 520 SVAAHKKLWFPNRLHKDFLEVMFTNRKERGELLEGLVISNKDVNIPNFPQRIHLLWGETD 341
S++ +KK+WFP+R +KD+L+ MF NRKER ELL+GL+ SN D IP F Q+I L+WGE D
Sbjct: 217 SISMYKKMWFPDRFYKDYLKAMFNNRKERMELLQGLITSNMDAKIPTFQQKIMLIWGEED 276
Query: 340 QIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQFIA 197
+IF +ELA+ MKE+LGD GI KAGHL+H+ERPC YNR L++F++
Sbjct: 277 KIFDIELAKKMKEQLGDGCFLHGIPKAGHLLHVERPCAYNRQLQRFLS 324
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,848,100
Number of Sequences: 1393205
Number of extensions: 8640034
Number of successful extensions: 20304
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 19934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20284
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
