Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001498A_C01 KMC001498A_c01
(540 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181374.1| putative beta-alanine-pyruvate aminotransferase... 163 1e-43
gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [... 163 3e-43
ref|NP_187498.1| putative aminotransferase; protein id: At3g0886... 165 2e-42
ref|NP_568064.1| putative protein; protein id: At4g39660.1, supp... 135 1e-35
gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 h... 135 1e-35
>ref|NP_181374.1| putative beta-alanine-pyruvate aminotransferase; protein id:
At2g38400.1, supported by cDNA: 147543., supported by
cDNA: gi_15028236, supported by cDNA: gi_5731260
[Arabidopsis thaliana] gi|7434183|pir||T02505 probable
beta-alanine-pyruvate aminotransferase At2g38400
[imported] - Arabidopsis thaliana
gi|3395432|gb|AAC28764.1| putative beta-alanine-pyruvate
aminotransferase [Arabidopsis thaliana]
gi|5731261|gb|AAD48838.1|AF166352_1 alanine:glyoxylate
aminotransferase 2 homolog [Arabidopsis thaliana]
gi|21553486|gb|AAM62579.1| putative
beta-alanine-pyruvate aminotransferase [Arabidopsis
thaliana] gi|25054854|gb|AAN71917.1| putative
beta-alanine-pyruvate aminotransferase [Arabidopsis
thaliana]
Length = 477
Score = 163 bits (412), Expect(2) = 1e-43
Identities = 78/103 (75%), Positives = 94/103 (90%)
Frame = -3
Query: 535 VCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALKDKYELIGDVRGQGMMLGVELVTD 356
V T AGLAVL VIEKEKLQ+NA +VGS+LKE+L LK+K+E+IGDVRG+G+MLGVELV+D
Sbjct: 356 VSTTAGLAVLNVIEKEKLQENAAMVGSYLKEKLTQLKEKHEIIGDVRGRGLMLGVELVSD 415
Query: 355 PKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCF 227
KLKTPA ETL++MD++KELGVL+GKGGY+GNVFRITPPLCF
Sbjct: 416 RKLKTPATAETLHIMDQMKELGVLIGKGGYFGNVFRITPPLCF 458
Score = 35.0 bits (79), Expect(2) = 1e-43
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 237 PCVSSKEDADFLVDAMDYTLSRM 169
P +K+DADFLV+AMDY++S+M
Sbjct: 455 PLCFTKDDADFLVEAMDYSMSKM 477
>gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [Arabidopsis
thaliana]
Length = 477
Score = 163 bits (412), Expect(2) = 3e-43
Identities = 78/103 (75%), Positives = 94/103 (90%)
Frame = -3
Query: 535 VCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALKDKYELIGDVRGQGMMLGVELVTD 356
V T AGLAVL VIEKEKLQ+NA +VGS+LKE+L LK+K+E+IGDVRG+G+MLGVELV+D
Sbjct: 356 VSTTAGLAVLNVIEKEKLQENAAMVGSYLKEKLTQLKEKHEIIGDVRGRGLMLGVELVSD 415
Query: 355 PKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCF 227
KLKTPA ETL++MD++KELGVL+GKGGY+GNVFRITPPLCF
Sbjct: 416 RKLKTPATAETLHIMDQMKELGVLIGKGGYFGNVFRITPPLCF 458
Score = 33.5 bits (75), Expect(2) = 3e-43
Identities = 14/23 (60%), Positives = 19/23 (81%)
Frame = -1
Query: 237 PCVSSKEDADFLVDAMDYTLSRM 169
P +K DADFLV+AMDY++S+M
Sbjct: 455 PLCFTKGDADFLVEAMDYSMSKM 477
>ref|NP_187498.1| putative aminotransferase; protein id: At3g08860.1, supported by
cDNA: gi_20466699 [Arabidopsis thaliana]
gi|6403506|gb|AAF07846.1|AC010871_22 putative
aminotransferase [Arabidopsis thaliana]
gi|20466700|gb|AAM20667.1| putative aminotransferase
[Arabidopsis thaliana]
Length = 481
Score = 165 bits (417), Expect(2) = 2e-42
Identities = 79/104 (75%), Positives = 93/104 (88%)
Frame = -3
Query: 538 PVCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALKDKYELIGDVRGQGMMLGVELVT 359
P+CTAAG AVLRV+ +EKLQ+NA +VGSHLK RL LK+KYELIGDVRG+G+MLGVE V
Sbjct: 359 PMCTAAGHAVLRVLHEEKLQENANLVGSHLKRRLTLLKNKYELIGDVRGRGLMLGVEFVK 418
Query: 358 DPKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCF 227
D LKTPAK ETL++MD++KE+GVLVGKGG+YGNVFRITPPLCF
Sbjct: 419 DRDLKTPAKAETLHLMDQMKEMGVLVGKGGFYGNVFRITPPLCF 462
Score = 29.3 bits (64), Expect(2) = 2e-42
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 237 PCVSSKEDADFLVDAMDYTLSRM 169
P + DADFLVD MD+ +S+M
Sbjct: 459 PLCFTLSDADFLVDVMDHAMSKM 481
>ref|NP_568064.1| putative protein; protein id: At4g39660.1, supported by cDNA:
gi_15809991, supported by cDNA: gi_5731258 [Arabidopsis
thaliana] gi|15809992|gb|AAL06923.1| AT4g39660/T19P19_50
[Arabidopsis thaliana] gi|25141217|gb|AAN73303.1|
At4g39660/T19P19_50 [Arabidopsis thaliana]
Length = 476
Score = 135 bits (341), Expect(2) = 1e-35
Identities = 63/104 (60%), Positives = 86/104 (82%)
Frame = -3
Query: 538 PVCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALKDKYELIGDVRGQGMMLGVELVT 359
PVC+A GLAVL VI+KEK Q++ VGSHL +RL ++ ++++IGDVRG+G+M+G+ELV+
Sbjct: 354 PVCSAGGLAVLNVIDKEKRQEHCAEVGSHLIQRLKDVQKRHDIIGDVRGRGLMVGIELVS 413
Query: 358 DPKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCF 227
D K KTPAK ET + ++L+ELG+LVGKGG +GNVFRI PP+CF
Sbjct: 414 DRKDKTPAKAETSVLFEQLRELGILVGKGGLHGNVFRIKPPMCF 457
Score = 35.4 bits (80), Expect(2) = 1e-35
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 237 PCVSSKEDADFLVDAMDYTLSRM 169
P +K+DADFLVDA+DY++SR+
Sbjct: 454 PMCFTKDDADFLVDALDYSISRL 476
>gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 homolog [Arabidopsis
thaliana]
Length = 476
Score = 135 bits (341), Expect(2) = 1e-35
Identities = 63/104 (60%), Positives = 86/104 (82%)
Frame = -3
Query: 538 PVCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALKDKYELIGDVRGQGMMLGVELVT 359
PVC+A GLAVL VI+KEK Q++ VGSHL +RL ++ ++++IGDVRG+G+M+G+ELV+
Sbjct: 354 PVCSAGGLAVLNVIDKEKRQEHCAEVGSHLIQRLKDVQKRHDIIGDVRGRGLMVGIELVS 413
Query: 358 DPKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCF 227
D K KTPAK ET + ++L+ELG+LVGKGG +GNVFRI PP+CF
Sbjct: 414 DRKDKTPAKAETSVLFEQLRELGILVGKGGLHGNVFRIKPPMCF 457
Score = 35.4 bits (80), Expect(2) = 1e-35
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 237 PCVSSKEDADFLVDAMDYTLSRM 169
P +K+DADFLVDA+DY++SR+
Sbjct: 454 PMCFTKDDADFLVDALDYSISRL 476
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,141,897
Number of Sequences: 1393205
Number of extensions: 9659887
Number of successful extensions: 28711
Number of sequences better than 10.0: 483
Number of HSP's better than 10.0 without gapping: 27483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28563
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
