Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001493A_C01 KMC001493A_c01
(960 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72531.1| alcohol dehydrogenase 1; ADH1 [Lotus corniculatus] 424 e-117
pir||S53307 alcohol dehydrogenase (EC 1.1.1.1) 1 - Phaseolus acu... 404 e-112
emb|CAA80692.1| alcohol dehydrogenase-1CN [Phaseolus acutifolius] 404 e-112
sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 gi|81891|pir||S00912 ... 403 e-111
sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1 gi|65900|pir||DEJYA... 402 e-111
>gb|AAO72531.1| alcohol dehydrogenase 1; ADH1 [Lotus corniculatus]
Length = 380
Score = 424 bits (1089), Expect = e-117
Identities = 210/218 (96%), Positives = 211/218 (96%)
Frame = -3
Query: 892 KDQPCCPT*QSCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 713
K P P + CILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR
Sbjct: 163 KINPAAPLDKVCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 222
Query: 712 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 533
IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA
Sbjct: 223 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 282
Query: 532 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 353
FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG
Sbjct: 283 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 342
Query: 352 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 239
ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE
Sbjct: 343 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 380
Score = 62.8 bits (151), Expect = 8e-09
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -1
Query: 948 FXGTSTFSEYTVLHAGCVAKINPAAPLDKV 859
F GTSTFSEYTVLHAGCVAKINPAAPLDKV
Sbjct: 144 FVGTSTFSEYTVLHAGCVAKINPAAPLDKV 173
>pir||S53307 alcohol dehydrogenase (EC 1.1.1.1) 1 - Phaseolus acutifolius
gi|452769|emb|CAA80691.1| alcohol dehydrogenase-1F
[Phaseolus acutifolius]
Length = 380
Score = 404 bits (1039), Expect = e-112
Identities = 200/218 (91%), Positives = 204/218 (92%)
Frame = -3
Query: 892 KDQPCCPT*QSCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 713
K P P + C+LSCGICTG GATVNVAKPKPGSSVAIFGLGAVGLAAAEGAR+SGASR
Sbjct: 163 KVNPAAPLDKICVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASR 222
Query: 712 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 533
IIGVDLVSSRFE AKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA
Sbjct: 223 IIGVDLVSSRFEEAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 282
Query: 532 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 353
FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLP VVE YM G
Sbjct: 283 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPLVVEQYMNG 342
Query: 352 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 239
ELEL+KFITHTV FSEINKAFDYMLKGESIRCIIRM E
Sbjct: 343 ELELDKFITHTVPFSEINKAFDYMLKGESIRCIIRMGE 380
Score = 60.8 bits (146), Expect = 3e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 948 FXGTSTFSEYTVLHAGCVAKINPAAPLDKV 859
F GTSTFSEYTV+HAGCVAK+NPAAPLDK+
Sbjct: 144 FVGTSTFSEYTVVHAGCVAKVNPAAPLDKI 173
>emb|CAA80692.1| alcohol dehydrogenase-1CN [Phaseolus acutifolius]
Length = 380
Score = 404 bits (1039), Expect = e-112
Identities = 200/218 (91%), Positives = 204/218 (92%)
Frame = -3
Query: 892 KDQPCCPT*QSCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 713
K P P + C+LSCGICTG GATVNVAKPKPGSSVAIFGLGAVGLAAAEGAR+SGASR
Sbjct: 163 KVNPAAPLDKICVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASR 222
Query: 712 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 533
IIGVDLVSSRFE AKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA
Sbjct: 223 IIGVDLVSSRFEEAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 282
Query: 532 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 353
FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLP VVE YM G
Sbjct: 283 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPLVVEQYMNG 342
Query: 352 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 239
ELEL+KFITHTV FSEINKAFDYMLKGESIRCIIRM E
Sbjct: 343 ELELDKFITHTVPFSEINKAFDYMLKGESIRCIIRMGE 380
Score = 58.9 bits (141), Expect = 1e-07
Identities = 25/28 (89%), Positives = 28/28 (99%)
Frame = -1
Query: 942 GTSTFSEYTVLHAGCVAKINPAAPLDKV 859
GTSTFSEYTV+HAGCVAK+NPAAPLDK+
Sbjct: 146 GTSTFSEYTVVHAGCVAKVNPAAPLDKI 173
>sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 gi|81891|pir||S00912 alcohol dehydrogenase
(EC 1.1.1.1) 1 - garden pea gi|20639|emb|CAA29609.1|
alcohol dehydrogenase [Pisum sativum]
Length = 380
Score = 403 bits (1036), Expect = e-111
Identities = 198/218 (90%), Positives = 207/218 (94%)
Frame = -3
Query: 892 KDQPCCPT*QSCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 713
K P P + CILSCGICTG GAT+NVAKPKPGSSVAIFGLGAVGLAAAEGAR+SGASR
Sbjct: 163 KINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASR 222
Query: 712 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 533
IIGVDLVSSRFE AKKFGVNEFVNPK+HDKPVQ+VIAEMTNGGVDRAVECTGSIQAMISA
Sbjct: 223 IIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISA 282
Query: 532 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 353
FECVHDGWGVAVLVGVP+KDDAFKTHP+NFLNERTLKGTFYGNYKPRTDLPNVVE YM+G
Sbjct: 283 FECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKG 342
Query: 352 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 239
ELELEKFITHTV FSEINKAFDYMLKGESIRCII+MEE
Sbjct: 343 ELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKMEE 380
Score = 59.3 bits (142), Expect = 8e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -1
Query: 948 FXGTSTFSEYTVLHAGCVAKINPAAPLDKV 859
F GTSTFSEYTV+HAGCVAKINP APLDKV
Sbjct: 144 FVGTSTFSEYTVVHAGCVAKINPDAPLDKV 173
>sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1 gi|65900|pir||DEJYAW alcohol dehydrogenase
(EC 1.1.1.1) 1 - white clover gi|21951|emb|CAA32934.1|
alcohol dehydrogenase I (AA 1-380) [Trifolium repens]
Length = 380
Score = 402 bits (1032), Expect = e-111
Identities = 198/218 (90%), Positives = 206/218 (93%)
Frame = -3
Query: 892 KDQPCCPT*QSCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASR 713
K P P + CILSCGICTG GATVNVAKPKPGSSVAIFGLGAVGLAAAEGAR+SGASR
Sbjct: 163 KINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARMSGASR 222
Query: 712 IIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISA 533
IIGVDLVSSRFE AKKFGVNEFVNPKDHDKPVQ+VIAEMT+GGVDRAVECTGSIQAMISA
Sbjct: 223 IIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISA 282
Query: 532 FECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPNVVEMYMRG 353
FECVHDGWGVAVLVGVP KDDAFKTHP+NFLNERTLKGTFYGNYKPRTDLPNVVE YM+G
Sbjct: 283 FECVHDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKG 342
Query: 352 ELELEKFITHTVSFSEINKAFDYMLKGESIRCIIRMEE 239
ELELEKFITH++ FSEINKAFDYMLKGESIRCIIRMEE
Sbjct: 343 ELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRMEE 380
Score = 59.3 bits (142), Expect = 8e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -1
Query: 948 FXGTSTFSEYTVLHAGCVAKINPAAPLDKV 859
F GTSTFSEYTV+HAGCVAKINP APLDKV
Sbjct: 144 FVGTSTFSEYTVVHAGCVAKINPDAPLDKV 173
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 872,119,897
Number of Sequences: 1393205
Number of extensions: 20998135
Number of successful extensions: 78206
Number of sequences better than 10.0: 1395
Number of HSP's better than 10.0 without gapping: 66994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76484
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 54355706272
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
