Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001479A_C01 KMC001479A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL55635.1|AF118134_1 hexokinase-related protein 1 [Solanum t... 164 5e-40
gb|AAK51560.1|AF372832_1 hexokinase II [Oryza sativa] 140 1e-32
gb|AAF99786.1|AC012463_3 T2E6.5 [Arabidopsis thaliana] 134 6e-31
ref|NP_175220.1| hexokinase, putative; protein id: At1g47840.1 [... 133 2e-30
emb|CAC81350.1| hexokinase [Lycopersicon esculentum] 109 3e-23
>gb|AAL55635.1|AF118134_1 hexokinase-related protein 1 [Solanum tuberosum]
Length = 499
Score = 164 bits (416), Expect = 5e-40
Identities = 83/112 (74%), Positives = 97/112 (86%)
Frame = -2
Query: 563 VESNISDRKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLICGKRTVVAIDGGLYE 384
V+S++S RKTV+++CDTI KRGG LAGAGIVGILQKMEEDSKGLI GKR VVA+DGGLYE
Sbjct: 388 VKSDLSARKTVVDICDTIAKRGGRLAGAGIVGILQKMEEDSKGLIFGKRAVVAMDGGLYE 447
Query: 383 NYPQYRAYLVDSVKGLLGTEKSNNVVIELSKDGSGIGAALLAASNSMYKQHF 228
+YPQYR YL ++V LLG+E S NVVIE SKDGSGIGAALLAA+NS Y+ +
Sbjct: 448 HYPQYRGYLQEAVTELLGSEISKNVVIEHSKDGSGIGAALLAAANSKYEHDY 499
>gb|AAK51560.1|AF372832_1 hexokinase II [Oryza sativa]
Length = 509
Score = 140 bits (352), Expect = 1e-32
Identities = 68/107 (63%), Positives = 87/107 (80%)
Frame = -2
Query: 560 ESNISDRKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLICGKRTVVAIDGGLYEN 381
++++ R+ +EV D I++RGG LAGAGIVGIL+KME DS+G I G+RTVVA+DGGLYE
Sbjct: 395 QASLLARRVTVEVSDCIIRRGGRLAGAGIVGILEKMENDSRGHIFGRRTVVAMDGGLYEK 454
Query: 380 YPQYRAYLVDSVKGLLGTEKSNNVVIELSKDGSGIGAALLAASNSMY 240
YPQYR Y+ ++V LLG E+SN + IE +KDGSGIGAALLAA+NS Y
Sbjct: 455 YPQYRRYMKEAVAELLGPERSNRIAIEHTKDGSGIGAALLAAANSKY 501
>gb|AAF99786.1|AC012463_3 T2E6.5 [Arabidopsis thaliana]
Length = 870
Score = 134 bits (338), Expect = 6e-31
Identities = 66/108 (61%), Positives = 90/108 (83%)
Frame = -2
Query: 563 VESNISDRKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLICGKRTVVAIDGGLYE 384
VE+N++ R+ V+EVCDT+VKRGG LAGAGIV IL+K+E+D+K + GKRTVVA+DG LYE
Sbjct: 763 VEANMNARRRVVEVCDTVVKRGGRLAGAGIVAILEKIEKDTKRMGSGKRTVVAMDGALYE 822
Query: 383 NYPQYRAYLVDSVKGLLGTEKSNNVVIELSKDGSGIGAALLAASNSMY 240
YPQYR Y+ D++ LLG + +++V I+ +KD SG+GAALLAA+NS+Y
Sbjct: 823 KYPQYRQYMQDALVELLGHKLASHVAIKHTKDVSGLGAALLAATNSIY 870
Score = 88.6 bits (218), Expect = 5e-17
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 34/116 (29%)
Frame = -2
Query: 563 VESNISDRKTVLEVCDTIVKRGGSLAGAGI------------------------------ 474
VE+N+ +R+ V+EVCDT+VKRGG LAGAG+
Sbjct: 204 VEANLQERRRVVEVCDTVVKRGGRLAGAGVNARIKQAAYVPLERDQATRSSYRDKRARPL 263
Query: 473 ----VGILQKMEEDSKGLICGKRTVVAIDGGLYENYPQYRAYLVDSVKGLLGTEKS 318
+ I++K+EE++K + GKRTVVA+DG LYENYPQY+ Y+ +++ LLG +S
Sbjct: 264 LEEGLAIVEKIEEETKRMDSGKRTVVAMDGSLYENYPQYQQYMEEALVELLGDNRS 319
>ref|NP_175220.1| hexokinase, putative; protein id: At1g47840.1 [Arabidopsis
thaliana]
Length = 493
Score = 133 bits (334), Expect = 2e-30
Identities = 65/108 (60%), Positives = 90/108 (83%)
Frame = -2
Query: 563 VESNISDRKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLICGKRTVVAIDGGLYE 384
V++N++ R+ V+EVCDT+VKRGG LAGAGIV IL+K+E+D+K + GKRTVVA+DG LYE
Sbjct: 386 VKANMNARRRVVEVCDTVVKRGGRLAGAGIVAILEKIEKDTKRMGSGKRTVVAMDGALYE 445
Query: 383 NYPQYRAYLVDSVKGLLGTEKSNNVVIELSKDGSGIGAALLAASNSMY 240
YPQYR Y+ D++ LLG + +++V I+ +KD SG+GAALLAA+NS+Y
Sbjct: 446 KYPQYRQYMQDALVELLGHKLASHVAIKHTKDVSGLGAALLAATNSIY 493
>emb|CAC81350.1| hexokinase [Lycopersicon esculentum]
Length = 498
Score = 109 bits (272), Expect = 3e-23
Identities = 55/106 (51%), Positives = 77/106 (71%)
Frame = -2
Query: 557 SNISDRKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLICGKRTVVAIDGGLYENY 378
+++ RK V+E+C+ + RG LA AG++GIL+KM D+ +RTV+A+DGGLYE+Y
Sbjct: 387 TSLKTRKLVVELCNIVATRGARLAAAGVLGILKKMGRDTPKQGGSERTVIAMDGGLYEHY 446
Query: 377 PQYRAYLVDSVKGLLGTEKSNNVVIELSKDGSGIGAALLAASNSMY 240
+YR L +S+K LLG E + ++V S DGSGIGAALLAAS+SMY
Sbjct: 447 TEYRMCLENSLKDLLGEELATSIVFVHSNDGSGIGAALLAASHSMY 492
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 460,139,445
Number of Sequences: 1393205
Number of extensions: 9889233
Number of successful extensions: 26283
Number of sequences better than 10.0: 186
Number of HSP's better than 10.0 without gapping: 25064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26037
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
