Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001463A_C01 KMC001463A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191726.1| putative protein; protein id: At3g61670.1 [Arab... 122 2e-27
ref|NP_192018.1| hypothetical protein; protein id: At4g01090.1, ... 112 2e-24
ref|NP_171651.1| hypothetical protein; protein id: At1g01440.1 [... 107 1e-22
ref|NP_182161.1| hypothetical protein; protein id: At2g46380.1 [... 91 1e-17
pir||T01730 hypothetical protein A_IG002N01.13 - Arabidopsis tha... 87 1e-16
>ref|NP_191726.1| putative protein; protein id: At3g61670.1 [Arabidopsis thaliana]
gi|11357467|pir||T47959 hypothetical protein F15G16.60 -
Arabidopsis thaliana gi|6850858|emb|CAB71097.1| putative
protein [Arabidopsis thaliana]
Length = 790
Score = 122 bits (307), Expect = 2e-27
Identities = 56/72 (77%), Positives = 65/72 (89%)
Frame = -2
Query: 559 VFVNGRELHPKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPTLEKVK 380
VFVNGRELH KDLDLL+GRGLP D DRSYI++I+GRV+DEDTGEELDCLGKLAPT+EK+K
Sbjct: 719 VFVNGRELHRKDLDLLAGRGLPPDRDRSYIVDITGRVIDEDTGEELDCLGKLAPTIEKLK 778
Query: 379 HGFGMKAPRAAT 344
GFGM+ P+ T
Sbjct: 779 RGFGMRLPKRTT 790
>ref|NP_192018.1| hypothetical protein; protein id: At4g01090.1, supported by cDNA:
gi_17979013, supported by cDNA: gi_20334761 [Arabidopsis
thaliana] gi|25407080|pir||D85014 hypothetical protein
AT4g01090 [imported] - Arabidopsis thaliana
gi|7267606|emb|CAB80918.1| hypothetical protein
[Arabidopsis thaliana] gi|17979014|gb|AAL47466.1|
AT4g01090/F2N1_13 [Arabidopsis thaliana]
gi|20334762|gb|AAM16242.1| AT4g01090/F2N1_13
[Arabidopsis thaliana]
Length = 714
Score = 112 bits (281), Expect = 2e-24
Identities = 51/70 (72%), Positives = 62/70 (87%)
Frame = -2
Query: 559 VFVNGRELHPKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPTLEKVK 380
VFVNGRELH +D +LL GRGLP D +RSYI++ISGR+LD+D+GEEL LGKLAPT+EKVK
Sbjct: 642 VFVNGRELHKRDFELLVGRGLPRDKNRSYIVDISGRILDQDSGEELHSLGKLAPTIEKVK 701
Query: 379 HGFGMKAPRA 350
HGFGM+ PR+
Sbjct: 702 HGFGMRVPRS 711
>ref|NP_171651.1| hypothetical protein; protein id: At1g01440.1 [Arabidopsis
thaliana]
Length = 664
Score = 107 bits (266), Expect = 1e-22
Identities = 50/70 (71%), Positives = 61/70 (86%)
Frame = -2
Query: 559 VFVNGRELHPKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPTLEKVK 380
VFVNGRELH +DL+LLS RGLP +RSYII+I+GRVLD D+GEEL LG+LAPT++KVK
Sbjct: 592 VFVNGRELHERDLELLSSRGLPRGKNRSYIIDIAGRVLDGDSGEELKSLGRLAPTVDKVK 651
Query: 379 HGFGMKAPRA 350
HGFGM+ PR+
Sbjct: 652 HGFGMRVPRS 661
>ref|NP_182161.1| hypothetical protein; protein id: At2g46380.1 [Arabidopsis
thaliana] gi|25408988|pir||B84902 hypothetical protein
At2g46380 [imported] - Arabidopsis thaliana
gi|4559381|gb|AAD23041.1| hypothetical protein
[Arabidopsis thaliana]
Length = 732
Score = 90.5 bits (223), Expect = 1e-17
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = -2
Query: 559 VFVNGRELHPKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPT 395
VFVNGRELH KDL LL+ RGLP D DRSY + ISGRV+DEDTGEELD LGKLAPT
Sbjct: 678 VFVNGRELHQKDLRLLTARGLPRDRDRSYTVYISGRVIDEDTGEELDSLGKLAPT 732
>pir||T01730 hypothetical protein A_IG002N01.13 - Arabidopsis thaliana
gi|2191134|gb|AAB61021.1| contains weak similarity to
Galectin-3 binding protein [Arabidopsis thaliana]
Length = 705
Score = 87.0 bits (214), Expect = 1e-16
Identities = 40/55 (72%), Positives = 48/55 (86%)
Frame = -2
Query: 559 VFVNGRELHPKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPT 395
VFVNGRELH +D +LL GRGLP D +RSYI++ISGR+LD+D+GEEL LGKLAPT
Sbjct: 651 VFVNGRELHKRDFELLVGRGLPRDKNRSYIVDISGRILDQDSGEELHSLGKLAPT 705
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,358,512
Number of Sequences: 1393205
Number of extensions: 10062073
Number of successful extensions: 23343
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23032
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
