Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001460A_C01 KMC001460A_c01
(745 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195650.1| brassinosteroid insensitive 1 gene (BRI1); prot... 153 3e-36
gb|AAN85409.1| BRI1 protein; similar to brassinosteroid insensit... 132 7e-30
gb|AAM48285.1| systemin receptor SR160 [Lycopersicon peruvianum] 132 7e-30
dbj|BAB68053.1| putative brassinosteroid-insensitive protein BRI... 118 1e-25
emb|CAC36390.1| hypothetical protein [Capsella rubella] 69 9e-11
>ref|NP_195650.1| brassinosteroid insensitive 1 gene (BRI1); protein id: At4g39400.1
[Arabidopsis thaliana] gi|7434421|pir||T09356
brassinosteroid-insensitive protein BRI1 - Arabidopsis
thaliana gi|2392895|gb|AAC49810.1| brassinosteroid
insensitive 1 [Arabidopsis thaliana]
gi|5042156|emb|CAB44675.1| brassinosteroid insensitive 1
gene (BRI1) [Arabidopsis thaliana]
gi|7270924|emb|CAB80603.1| brassinosteroid insensitive 1
gene (BRI1) [Arabidopsis thaliana]
Length = 1196
Score = 153 bits (386), Expect = 3e-36
Identities = 76/91 (83%), Positives = 84/91 (91%), Gaps = 1/91 (1%)
Frame = -1
Query: 745 HAKLKISDVFDPELMKEDPHLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGS 566
HAKL+ISDVFDPELMKEDP LEIELLQHLKVA ACLDDR WRRPTM+QVMAMFKEIQAGS
Sbjct: 1103 HAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQAGS 1162
Query: 565 GMDSQSTI-ATDDEGFNAVEMVEMSIKEVPE 476
G+DSQSTI + +D GF+ +EMV+MSIKEVPE
Sbjct: 1163 GIDSQSTIRSIEDGGFSTIEMVDMSIKEVPE 1193
>gb|AAN85409.1| BRI1 protein; similar to brassinosteroid insensitive 1 [Lycopersicon
esculentum]
Length = 1207
Score = 132 bits (331), Expect = 7e-30
Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 5/100 (5%)
Frame = -1
Query: 745 HAKLKISDVFDPELMKEDPHLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGS 566
HAK KI+DVFD EL+KED +EIELLQHLKVACACLDDR W+RPTMIQVMAMFKEIQAGS
Sbjct: 1108 HAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGS 1167
Query: 565 GMDSQSTIATDDEGFNAVE-MVEM----SIKEVPELEQAL 461
GMDS STI DD F+ VE +EM SIKE EL + L
Sbjct: 1168 GMDSTSTIGADDVNFSGVEGGIEMGINGSIKEGNELSKHL 1207
>gb|AAM48285.1| systemin receptor SR160 [Lycopersicon peruvianum]
Length = 1207
Score = 132 bits (331), Expect = 7e-30
Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 5/100 (5%)
Frame = -1
Query: 745 HAKLKISDVFDPELMKEDPHLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGS 566
HAK KI+DVFD EL+KED +EIELLQHLKVACACLDDR W+RPTMIQVMAMFKEIQAGS
Sbjct: 1108 HAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGS 1167
Query: 565 GMDSQSTIATDDEGFNAVE-MVEM----SIKEVPELEQAL 461
GMDS STI DD F+ VE +EM SIKE EL + L
Sbjct: 1168 GMDSTSTIGADDVNFSGVEGGIEMGINGSIKEGNELSKHL 1207
>dbj|BAB68053.1| putative brassinosteroid-insensitive protein BRI1 [Oryza sativa
(japonica cultivar-group)]
Length = 1121
Score = 118 bits (295), Expect = 1e-25
Identities = 57/91 (62%), Positives = 73/91 (79%), Gaps = 4/91 (4%)
Frame = -1
Query: 745 HAKLKISDVFDPELMKEDPHLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGS 566
H KLKI+DVFDPEL+KEDP +E+ELL+HLK+ACACLDDRP RRPTM++VMAMFKEIQAGS
Sbjct: 1028 HTKLKITDVFDPELLKEDPSVELELLEHLKIACACLDDRPSRRPTMLKVMAMFKEIQAGS 1087
Query: 565 GMDSQSTIAT----DDEGFNAVEMVEMSIKE 485
+DS+++ A D+ G+ ++M KE
Sbjct: 1088 TVDSKTSSAAAGSIDEGGYGVLDMPLREAKE 1118
>emb|CAC36390.1| hypothetical protein [Capsella rubella]
Length = 1166
Score = 68.6 bits (166), Expect = 9e-11
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = -1
Query: 727 SDVFDPELMKEDPHLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGMDSQS 548
+++ DPEL+ E + EL +LK+A CLDDRP++RPTMIQVMAMFKE++A +
Sbjct: 1089 TEILDPELVTEKSG-DAELFHYLKIASQCLDDRPFKRPTMIQVMAMFKELKADT------ 1141
Query: 547 TIATDDEGFNAVEMVEMSIKEVPELEQA 464
+DE + E S+KE P +E++
Sbjct: 1142 ---EEDESLD-----EFSLKETPLVEES 1161
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 649,490,243
Number of Sequences: 1393205
Number of extensions: 14150042
Number of successful extensions: 30461
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 29405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30456
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 35751090169
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
