Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001459A_C01 KMC001459A_c01
(1080 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172834.1| hypothetical protein; protein id: At1g13790.1 [... 138 2e-31
dbj|BAB18280.1| putative transcription factor [Oryza sativa (jap... 135 8e-31
dbj|BAB02266.1| transcription factor X1-like protein [Arabidopsi... 134 2e-30
ref|NP_187861.1| unknown protein; protein id: At3g12550.1 [Arabi... 134 2e-30
gb|AAO38006.1| putative transcription factor [Oryza sativa (japo... 128 2e-28
>ref|NP_172834.1| hypothetical protein; protein id: At1g13790.1 [Arabidopsis thaliana]
gi|25402764|pir||D86271 protein F16A14.2 [imported] -
Arabidopsis thaliana gi|8778384|gb|AAF79392.1|AC068197_2
F16A14.2 [Arabidopsis thaliana]
Length = 736
Score = 138 bits (347), Expect = 2e-31
Identities = 64/125 (51%), Positives = 90/125 (71%)
Frame = -1
Query: 1080 FIKAAKRKFSGDDVNIKAVEFCSEWEDYLRDPSWHPFKILTDKEGKSKEILDEDDEKIRI 901
F K AK K+ + + KA E CS WE++L D +WHP K++ +K+G +KE L+E+DEK++
Sbjct: 612 FKKVAKEKYPAVEADKKAEELCSLWEEHLGDSAWHPIKVV-EKDGIAKEELNEEDEKLQE 670
Query: 900 LKDEFGDEVYEAVTTALKELNEYNPSGRYPIPELWNFEEGRKALLKEGIEHILKQWKSKP 721
L+ E G+EVY AVT ALKE NEYN SGRY +PELWNF++ RKA +KEG+ +++ WK K
Sbjct: 671 LRKELGEEVYAAVTQALKERNEYNGSGRYIVPELWNFKQNRKASIKEGVVYLVNSWKQKK 730
Query: 720 QENTR 706
+ R
Sbjct: 731 PKPKR 735
>dbj|BAB18280.1| putative transcription factor [Oryza sativa (japonica
cultivar-group)] gi|12328532|dbj|BAB21190.1| putative
transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 560
Score = 135 bits (341), Expect = 8e-31
Identities = 61/122 (50%), Positives = 86/122 (70%)
Frame = -1
Query: 1080 FIKAAKRKFSGDDVNIKAVEFCSEWEDYLRDPSWHPFKILTDKEGKSKEILDEDDEKIRI 901
F A K++ +D ++ A E CS WE+ +++ WHPF+++ +GK EIL EDD K+
Sbjct: 439 FTNAYKQRSLEEDADVSAAELCSLWENEIKNSDWHPFRVVM-VDGKEMEILSEDDGKLCE 497
Query: 900 LKDEFGDEVYEAVTTALKELNEYNPSGRYPIPELWNFEEGRKALLKEGIEHILKQWKSKP 721
LK+E G+E+ VT AL ELNEYNPSGRYP+PELWNF+E RKA LKE ++++L QWK
Sbjct: 498 LKEEHGEEICAMVTKALLELNEYNPSGRYPVPELWNFKENRKATLKEVVQYVLNQWKKNK 557
Query: 720 QE 715
++
Sbjct: 558 RK 559
>dbj|BAB02266.1| transcription factor X1-like protein [Arabidopsis thaliana]
Length = 638
Score = 134 bits (338), Expect = 2e-30
Identities = 62/117 (52%), Positives = 84/117 (70%), Gaps = 1/117 (0%)
Frame = -1
Query: 1080 FIKAAKRKFSGDDVNIKAVEFCSEWEDYLRDPSWHPFKILTDKEGKS-KEILDEDDEKIR 904
F+KA + K+ +D+ AVE WE+YL+DP WHPFK + + ++ E++DEDDEK+R
Sbjct: 514 FMKAMRIKYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLR 573
Query: 903 ILKDEFGDEVYEAVTTALKELNEYNPSGRYPIPELWNFEEGRKALLKEGIEHILKQW 733
LK+E GD+ Y+AV AL E+NEYNPSGRY ELWNF E RKA L+EG+ +L+QW
Sbjct: 574 TLKNELGDDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQW 630
>ref|NP_187861.1| unknown protein; protein id: At3g12550.1 [Arabidopsis thaliana]
gi|12321947|gb|AAG51004.1|AC069474_3 unknown protein;
49125-46422 [Arabidopsis thaliana]
Length = 635
Score = 134 bits (338), Expect = 2e-30
Identities = 62/117 (52%), Positives = 84/117 (70%), Gaps = 1/117 (0%)
Frame = -1
Query: 1080 FIKAAKRKFSGDDVNIKAVEFCSEWEDYLRDPSWHPFKILTDKEGKS-KEILDEDDEKIR 904
F+KA + K+ +D+ AVE WE+YL+DP WHPFK + + ++ E++DEDDEK+R
Sbjct: 511 FMKAMRIKYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLR 570
Query: 903 ILKDEFGDEVYEAVTTALKELNEYNPSGRYPIPELWNFEEGRKALLKEGIEHILKQW 733
LK+E GD+ Y+AV AL E+NEYNPSGRY ELWNF E RKA L+EG+ +L+QW
Sbjct: 571 TLKNELGDDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQW 627
>gb|AAO38006.1| putative transcription factor [Oryza sativa (japonica
cultivar-group)] gi|28875998|gb|AAO60007.1| putative
transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 226
Score = 128 bits (321), Expect = 2e-28
Identities = 57/124 (45%), Positives = 82/124 (65%)
Frame = -1
Query: 1080 FIKAAKRKFSGDDVNIKAVEFCSEWEDYLRDPSWHPFKILTDKEGKSKEILDEDDEKIRI 901
F A K K + + + V CS+WED + P WHPFK++ + G++KEI+ EDD K++
Sbjct: 106 FYNACKNKMPNNKMKLALV--CSKWEDEITKPEWHPFKVI-ETAGQTKEIIKEDDGKLQA 162
Query: 900 LKDEFGDEVYEAVTTALKELNEYNPSGRYPIPELWNFEEGRKALLKEGIEHILKQWKSKP 721
L+ ++GDE V AL E+NEYNPSG YP+PELWNF++ R A + E ++LKQWK+
Sbjct: 163 LRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAPMPEAASYLLKQWKTHK 222
Query: 720 QENT 709
+ NT
Sbjct: 223 KRNT 226
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 951,826,637
Number of Sequences: 1393205
Number of extensions: 21930195
Number of successful extensions: 62191
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62069
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 64843979345
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
