>KMC001407A_C01 KMC001407A_c01
GTGTGGACTGGACCAAAGAAGCATGCACGAGAATCACAAATCAATCCAACAATAATCATA
ATCAACATCTACAACCACTGTAACCAAAAAAAAAAAAACATCTACAACCCGCTTGAAAAT
AAGTATTAGTAGCACTATCCATAAGATTCACAAAGAACTTATTAGCTAAAACCACCAAAC
ATTATTAGTACCATTAAAATGATCTTAACATTTGAAGCTAAAGCTTGGTGTTCTAAATCA
AGTGCATTTTCTTCTGGTCTGGCAAACAATGGACGGTTGACTGTTCTTCTTTAAGTTCGC
TTTCCATTGATTTGTTTCTTTCTTTCAGTGATGACAAGTCGGTTAATGTGCATTAAGATG
GCTGTCTGCAGTATCCATTnAAAGAGGTTCCGTGCTTCTTTCTCTGGCAGGTTCACATTA
CTCTTGAGTAACAACGCAGnCCCAATTTCTACAAAACCATATGCAGCATCATTCAGATGC
TCCCCGGCACTAATTTCTCCAGATATCTCAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001407A_C01 KMC001407A_c01
         (511 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_473297.1| hypothetical protein [Plasmodium falciparum 3D7...    33  2.5
ref|NP_039292.1| ORF2136 [Marchantia polymorpha] gi|140550|sp|P0...    32  3.3
pir||C49423 semaphorin II precursor - fruit fly (Drosophila mela...    32  4.2
ref|NP_477507.1| CG4700-PA [Drosophila melanogaster] gi|19549754...    32  4.2
ref|NP_725586.1| CG4700-PC [Drosophila melanogaster] gi|21627096...    32  4.2

>ref|NP_473297.1| hypothetical protein [Plasmodium falciparum 3D7]
            gi|7494262|pir||T18489 hypothetical protein C0820w -
            malaria parasite (Plasmodium falciparum)
            gi|3758843|emb|CAB11128.1| hypothetical protein
            [Plasmodium falciparum 3D7]
          Length = 4981

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 22/71 (30%), Positives = 35/71 (48%), Gaps = 1/71 (1%)
 Frame = +1

Query: 1    VWTGPKKHARESQINPTIIIINIYNHCNQ-KKKNIYNPLENKY**HYP*DSQRTY*LKPP 177
            +W   KK+  +   N  II+ N+YN+ +  KKKNI N L+      Y  D Q+ Y     
Sbjct: 1653 IWLNKKKNDSQVDFNNFIILSNMYNNSDTFKKKNIQNVLQ------YLNDYQQVY---KK 1703

Query: 178  NIISTIKMILT 210
            N++    M ++
Sbjct: 1704 NVVHIFNMYIS 1714

>ref|NP_039292.1| ORF2136 [Marchantia polymorpha] gi|140550|sp|P09975|YCF2_MARPO
           Hypothetical 259.9 kDa protein ycf2 (ORF 2136)
           gi|81341|pir||A05037 hypothetical protein 2136 -
           liverwort (Marchantia polymorpha) chloroplast
           gi|11665|emb|CAA28078.1| ORF2136 [Marchantia polymorpha]
          Length = 2136

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 18/37 (48%), Positives = 22/37 (58%)
 Frame = +1

Query: 16  KKHARESQINPTIIIINIYNHCNQKKKNIYNPLENKY 126
           KK  +  Q NP I I++ Y   N  KKNIY  L+NKY
Sbjct: 670 KKRKKNFQFNPNIKILSFY---NSSKKNIY--LQNKY 701

>pir||C49423 semaphorin II precursor - fruit fly (Drosophila melanogaster)
          Length = 724

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 316 FFLSVMTSRLMCIKMAVCSIHXKRFRASFSGRFTLLLSNNA 438
           FF +  TS    I  AVCS H    +A+F+G+F    S+N+
Sbjct: 341 FFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNS 381

>ref|NP_477507.1| CG4700-PA [Drosophila melanogaster] gi|19549754|ref|NP_599130.1|
           CG4700-PB [Drosophila melanogaster]
           gi|7302917|gb|AAF57989.1| CG4700-PA [Drosophila
           melanogaster] gi|7302918|gb|AAF57990.1| CG4700-PB
           [Drosophila melanogaster] gi|20151989|gb|AAM11354.1|
           LD09561p [Drosophila melanogaster]
           gi|21711679|gb|AAM75030.1| LD09306p [Drosophila
           melanogaster]
          Length = 724

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 316 FFLSVMTSRLMCIKMAVCSIHXKRFRASFSGRFTLLLSNNA 438
           FF +  TS    I  AVCS H    +A+F+G+F    S+N+
Sbjct: 341 FFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNS 381

>ref|NP_725586.1| CG4700-PC [Drosophila melanogaster] gi|21627096|gb|AAM68500.1|
           CG4700-PC [Drosophila melanogaster]
          Length = 697

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 316 FFLSVMTSRLMCIKMAVCSIHXKRFRASFSGRFTLLLSNNA 438
           FF +  TS    I  AVCS H    +A+F+G+F    S+N+
Sbjct: 314 FFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNS 354

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 409,246,006
Number of Sequences: 1393205
Number of extensions: 7689280
Number of successful extensions: 19834
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19801
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GENLf084h11 BP066951 1 511 2 GNf028g08 BP069415 26 126

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