>KMC001403A_C02 KMC001403A_c02
ctattCGAGAAACAAAAATAATTTTATTTCAATGGTAACAACTTGGGAAGAACTCTCTCA
AGTGAGTATTTAAAATACATCAGTACCCATACCAATAATCCCAATAAAACATGGATAATA
TCCTTTTACCAACACAATTATAGAATGAACCAATACTAGATTGGAAACACCCATATAATC
AAACCCACCATCATACATATTACATCAGCAAAAGCATATTTCTATGATCCAAGCTCCCTG
GCTTCATCCATGTAAAATTTCATCAGAAAATAATTTTCAAAACAACCCCTGATGAACTAA
TATTTCTGAACAATATCAAAACCCTTCAAAGAAATCTCTCAATGATCTATTTGGTATCAC
CTAACCAAGAGAGATTTCTAAGCACAGATGCTTTAACCTTCTCATGCATATAGCTAATAT
ACCCCAGCCAATAAAGTTCTAACCCAACTTTCCACATCAGCGAACTTCAGTAAACAGTAG
TTCTGTGATAAATAGCTTTTGTATAATTAAGAAATGAAGACTAGCTGTGTCGAAATCCAG
TGTAGGTTTATTATACACTATCATGATATACACCGCATGTTCAAAAGATCAATGAATAAT
GCCTCATATAGACCTGCATGCTTAGT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001403A_C02 KMC001403A_c02
         (626 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_701862.1| reticulocyte-binding protein, putative [Plasmod...    33  4.0

>ref|NP_701862.1| reticulocyte-binding protein, putative [Plasmodium falciparum 3D7]
            gi|23497036|gb|AAN36586.1|AE014852_30
            reticulocyte-binding protein, putative [Plasmodium
            falciparum 3D7]
          Length = 2792

 Score = 32.7 bits (73), Expect = 4.0
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61   SEYLKYISTHTNNPNKTWIISFYQHNYRMNQY*IGNTHIIKPTI----IHITSAKAYF 222
            +EY+  I+ + NN NK + I+    N + N Y + N H IK  I     H+ + KA F
Sbjct: 2421 NEYMNKINKNINNTNKEFDITL--RNIKTNNYFVNNNHEIKKVIDNFWNHLDTIKANF 2476

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,512,232
Number of Sequences: 1393205
Number of extensions: 11283655
Number of successful extensions: 22354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22345
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPDL018c02_f AV777393 1 626 2 MPDL026a09_f AV777787 6 353 3 MPDL006d06_f AV776818 6 363 4 GNf026d06 BP069241 6 426 5 GENLf084e02 BP066929 6 485 6 MWM033c11_f AV765180 11 442 7 MRL006f05_f BP086047 48 493

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