Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001367A_C01 KMC001367A_c01
(673 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB32902.1| putative heat-shock protein [Oryza sativa (japon... 63 3e-09
gb|AAL38353.1| putative heat-shock protein [Arabidopsis thaliana] 55 1e-06
pir||S74252 heat shock protein 91 - Arabidopsis thaliana gi|1495... 52 7e-06
ref|NP_178111.1| putative heat-shock protein; protein id: At1g79... 52 1e-05
ref|NP_172631.1| putative heat-shock protein; protein id: At1g11... 51 2e-05
>dbj|BAB32902.1| putative heat-shock protein [Oryza sativa (japonica
cultivar-group)] gi|13161454|dbj|BAB33024.1| putative
heat-shock protein [Oryza sativa (japonica
cultivar-group)]
Length = 845
Score = 63.2 bits (152), Expect = 3e-09
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = -1
Query: 673 QDKVLIINECSEVKRWLSEKMQQQDSFPKNVDPILWSSDIKSRTEDLNLMFQRILKSRAS 494
++K +IN+CSE + WL EK+QQQD+ PK+ +P+L SSD+K + E ++ F + + +
Sbjct: 726 EEKQKVINQCSEAEVWLREKIQQQDALPKHANPVLLSSDLKKKAETVD-RFCKPIMMKPK 784
Query: 493 PSPEYKDKPDT 461
P+P+ + P T
Sbjct: 785 PAPKPQTPPQT 795
>gb|AAL38353.1| putative heat-shock protein [Arabidopsis thaliana]
Length = 831
Score = 54.7 bits (130), Expect = 1e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = -1
Query: 670 DKVLIINECSEVKRWLSEKMQQQDSFPKNVDPILWSSDIKSRTEDLNLMFQRILKSRASP 491
+K ++NEC E + WL EK QQQD+ PK P L S+D+KS+ E L+ F R + ++ P
Sbjct: 732 EKQKVLNECVEAEAWLREKQQQQDTLPKYATPALLSADVKSKAEALD-KFCRPIMTKPKP 790
Query: 490 S 488
+
Sbjct: 791 A 791
>pir||S74252 heat shock protein 91 - Arabidopsis thaliana
gi|1495251|emb|CAA94389.1| heat-shock protein
[Arabidopsis thaliana]
Length = 831
Score = 52.0 bits (123), Expect = 7e-06
Identities = 25/61 (40%), Positives = 38/61 (61%)
Frame = -1
Query: 670 DKVLIINECSEVKRWLSEKMQQQDSFPKNVDPILWSSDIKSRTEDLNLMFQRILKSRASP 491
+K ++NEC E + WL K QQQD+ PK P L S+D+KS+ E L+ F R + ++ P
Sbjct: 732 EKQKVLNECVEAEAWLRGKQQQQDTLPKYATPALLSADVKSKAEALD-KFCRPIMTKPKP 790
Query: 490 S 488
+
Sbjct: 791 A 791
>ref|NP_178111.1| putative heat-shock protein; protein id: At1g79930.1, supported by
cDNA: gi_19310472 [Arabidopsis thaliana]
gi|25326734|pir||E96830 hypothetical protein F18B13.1
[imported] - Arabidopsis thaliana
gi|5902359|gb|AAD55461.1|AC009322_1 Heat-shock protein
[Arabidopsis thaliana]
gi|12324579|gb|AAG52240.1|AC011717_8 putative heat-shock
protein; 37113-40399 [Arabidopsis thaliana]
gi|19310473|gb|AAL84971.1| At1g79930/F19K16_11
[Arabidopsis thaliana] gi|27363244|gb|AAO11541.1|
At1g79930/F19K16_11 [Arabidopsis thaliana]
Length = 831
Score = 51.6 bits (122), Expect = 1e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = -1
Query: 670 DKVLIINECSEVKRWLSEKMQQQDSFPKNVDPILWSSDIKSRTEDLNLMFQRILKSRASP 491
+K ++NEC E + WL K QQQD+ PK P L S+D+KS+ E L+ F R + ++ P
Sbjct: 732 EKQKVLNECVEAEAWLRGKQQQQDTLPKYATPALLSADVKSKAEALD-KFCRPIMTKPKP 790
>ref|NP_172631.1| putative heat-shock protein; protein id: At1g11660.1 [Arabidopsis
thaliana]
Length = 773
Score = 50.8 bits (120), Expect = 2e-05
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -1
Query: 667 KVLIINECSEVKRWLSEKMQQQDSFPKNVDPILWSSDIKSRTEDLNLMFQRILKSRASPS 488
K +++EC + +RWL EK +Q+S PK+ +P L S++I+ + + LN + I KS + P+
Sbjct: 695 KNAVLDECHKAERWLHEKTTEQESLPKDANPELQSAEIRRKADALNATCKYIGKSNSPPA 754
Query: 487 -PEY 479
PE+
Sbjct: 755 KPEH 758
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 546,260,961
Number of Sequences: 1393205
Number of extensions: 11354587
Number of successful extensions: 33979
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33975
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29421376608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
