Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001365A_C01 KMC001365A_c01
(616 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177421.1| protein phosphatase 2C (AtP2C-HA); protein id: ... 118 7e-26
emb|CAA05875.1| protein phosphatase 2C [Arabidopsis thaliana] 118 7e-26
ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g5... 114 1e-24
gb|AAF79469.1|AC022492_13 F1L3.26 [Arabidopsis thaliana] 112 3e-24
ref|NP_173199.1| protein phosphatase 2C, putative; protein id: A... 112 3e-24
>ref|NP_177421.1| protein phosphatase 2C (AtP2C-HA); protein id: At1g72770.1
[Arabidopsis thaliana] gi|25406209|pir||F96752 protein
phosphatase 2C (AtP2C-HA), 19519-17666 [imported] -
Arabidopsis thaliana
gi|12323769|gb|AAG51849.1|AC010926_12 protein
phosphatase 2C (AtP2C-HA); 19519-17666 [Arabidopsis
thaliana]
Length = 511
Score = 118 bits (295), Expect = 7e-26
Identities = 54/78 (69%), Positives = 67/78 (85%)
Frame = -1
Query: 616 LWDVMTNEEACDLARRRILFWHKKNGLSMSSERGEGIDPAAQAAAEFLSNRALLKGSKDN 437
LWDVM N+E C++ARRRIL WHKKNG +ERG+GIDPA QAAA++LS AL KGSKDN
Sbjct: 434 LWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDN 493
Query: 436 ITVIVVDLKAQRKFKSKS 383
I++IV+DLKAQRKFK+++
Sbjct: 494 ISIIVIDLKAQRKFKTRT 511
>emb|CAA05875.1| protein phosphatase 2C [Arabidopsis thaliana]
Length = 511
Score = 118 bits (295), Expect = 7e-26
Identities = 54/78 (69%), Positives = 67/78 (85%)
Frame = -1
Query: 616 LWDVMTNEEACDLARRRILFWHKKNGLSMSSERGEGIDPAAQAAAEFLSNRALLKGSKDN 437
LWDVM N+E C++ARRRIL WHKKNG +ERG+GIDPA QAAA++LS AL KGSKDN
Sbjct: 434 LWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDN 493
Query: 436 ITVIVVDLKAQRKFKSKS 383
I++IV+DLKAQRKFK+++
Sbjct: 494 ISIIVIDLKAQRKFKTRT 511
>ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g57050.1 [Arabidopsis
thaliana] gi|3914239|sp|O04719|P2C2_ARATH Protein
phosphatase 2C ABI2 (PP2C) (Abscisic acid-insensitive 2)
gi|1945140|emb|CAA70163.1| ABI2 protein phosphatase 2C
[Arabidopsis thaliana] gi|1945142|emb|CAA70162.1| ABI2
protein phosphatase 2C [Arabidopsis thaliana]
gi|2564213|emb|CAA72538.1| ABI2 [Arabidopsis thaliana]
gi|8777445|dbj|BAA97035.1| protein phosphatase 2C ABI2
(PP2C) [Arabidopsis thaliana] gi|22531154|gb|AAM97081.1|
protein phosphatase 2C ABI2 [Arabidopsis thaliana]
Length = 423
Score = 114 bits (284), Expect = 1e-24
Identities = 57/83 (68%), Positives = 66/83 (78%), Gaps = 5/83 (6%)
Frame = -1
Query: 616 LWDVMTNEEACDLARRRILFWHKKNGLS-----MSSERGEGIDPAAQAAAEFLSNRALLK 452
LWDVMTNEE CDLAR+RIL WHKKN ++ + +RGEG DPAA +AAE+LS AL K
Sbjct: 339 LWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQK 398
Query: 451 GSKDNITVIVVDLKAQRKFKSKS 383
GSKDNI+V+VVDLK RKFKSKS
Sbjct: 399 GSKDNISVVVVDLKGIRKFKSKS 421
>gb|AAF79469.1|AC022492_13 F1L3.26 [Arabidopsis thaliana]
Length = 656
Score = 112 bits (281), Expect = 3e-24
Identities = 54/78 (69%), Positives = 64/78 (81%)
Frame = -1
Query: 616 LWDVMTNEEACDLARRRILFWHKKNGLSMSSERGEGIDPAAQAAAEFLSNRALLKGSKDN 437
LWDVM+N+EACD ARRRIL WHKKNG +ERG G D A QAAAE+LS A+ GSKDN
Sbjct: 579 LWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDN 638
Query: 436 ITVIVVDLKAQRKFKSKS 383
I++IV+DLKAQRKFK++S
Sbjct: 639 ISIIVIDLKAQRKFKTRS 656
>ref|NP_173199.1| protein phosphatase 2C, putative; protein id: At1g17550.1
[Arabidopsis thaliana]
Length = 527
Score = 112 bits (281), Expect = 3e-24
Identities = 54/78 (69%), Positives = 64/78 (81%)
Frame = -1
Query: 616 LWDVMTNEEACDLARRRILFWHKKNGLSMSSERGEGIDPAAQAAAEFLSNRALLKGSKDN 437
LWDVM+N+EACD ARRRIL WHKKNG +ERG G D A QAAAE+LS A+ GSKDN
Sbjct: 450 LWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDN 509
Query: 436 ITVIVVDLKAQRKFKSKS 383
I++IV+DLKAQRKFK++S
Sbjct: 510 ISIIVIDLKAQRKFKTRS 527
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,336,991
Number of Sequences: 1393205
Number of extensions: 10259194
Number of successful extensions: 24620
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 24064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24539
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
