Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001336A_C01 KMC001336A_c01
(695 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta... 133 2e-30
gb|AAK51086.1|AF363285_1 mitochondrial processing peptidase [Avi... 122 5e-27
ref|NP_186858.1| putative mitochondrial processing peptidase; pr... 120 1e-26
pir||A48529 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) 55K p... 115 6e-25
emb|CAA56521.1| mitochondrial processing peptidase [Solanum tube... 115 6e-25
>gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta subunit [Cucumis melo]
Length = 528
Score = 133 bits (335), Expect = 2e-30
Identities = 71/116 (61%), Positives = 81/116 (69%)
Frame = -1
Query: 671 HAALLSTLELVYRLKQIIIRQLFICLWQAFFCKTDTLLPFDVSLLYIFIFFQLLTYGRRI 492
+A + T +L YR+ + + + L + D P I QLLTYGRRI
Sbjct: 418 YAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAED-----IGRQLLTYGRRI 472
Query: 491 PFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY 324
PFAELFARIDAVDASTIKRVANRFIYD+DIAIAA+GPIQ LPDYNWFRRRTYWNRY
Sbjct: 473 PFAELFARIDAVDASTIKRVANRFIYDRDIAIAALGPIQGLPDYNWFRRRTYWNRY 528
>gb|AAK51086.1|AF363285_1 mitochondrial processing peptidase [Avicennia marina]
Length = 527
Score = 122 bits (306), Expect = 5e-27
Identities = 56/65 (86%), Positives = 62/65 (95%)
Frame = -1
Query: 518 QLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRT 339
QLLTYGRRIP+AELFARIDAVD STIKRVANRFI+D+D+AI+A+GPIQ LPDYNWFRRRT
Sbjct: 463 QLLTYGRRIPYAELFARIDAVDPSTIKRVANRFIFDRDVAISAVGPIQGLPDYNWFRRRT 522
Query: 338 YWNRY 324
YW RY
Sbjct: 523 YWLRY 527
>ref|NP_186858.1| putative mitochondrial processing peptidase; protein id:
At3g02090.1, supported by cDNA: gi_15982730 [Arabidopsis
thaliana] gi|6513923|gb|AAF14827.1|AC011664_9 putative
mitochondrial processing peptidase [Arabidopsis
thaliana] gi|22022518|gb|AAM83217.1| AT3g02090/F1C9_12
[Arabidopsis thaliana] gi|23397047|gb|AAN31809.1|
putative mitochondrial processing peptidase [Arabidopsis
thaliana] gi|23463071|gb|AAN33205.1| At3g02090/F1C9_12
[Arabidopsis thaliana] gi|25054848|gb|AAN71914.1|
putative mitochondrial processing peptidase [Arabidopsis
thaliana]
Length = 531
Score = 120 bits (302), Expect = 1e-26
Identities = 57/65 (87%), Positives = 62/65 (94%)
Frame = -1
Query: 518 QLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRT 339
QLLTYGRRIP AELFARIDAVDAST+KRVAN++IYDKDIAI+A+GPIQ LPDYN FRRRT
Sbjct: 467 QLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRT 526
Query: 338 YWNRY 324
YWNRY
Sbjct: 527 YWNRY 531
>pir||A48529 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) 55K protein
precursor - potato gi|410633|gb|AAB28041.1| cytochrome c
reductase-processing peptidase subunit I, MPP subunit I,
P55 [potatoes, var. Marfona, tuber, Peptide
Mitochondrial, 534 aa]
Length = 534
Score = 115 bits (288), Expect = 6e-25
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = -1
Query: 518 QLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRT 339
QL+TYGRRIP+AELF+RID+VD TIKRV NRFI+D+D+AI+A GPIQ LPDYNWFRRRT
Sbjct: 470 QLITYGRRIPYAELFSRIDSVDTGTIKRVRNRFIFDRDVAISARGPIQDLPDYNWFRRRT 529
Query: 338 YWNRY 324
YW RY
Sbjct: 530 YWLRY 534
>emb|CAA56521.1| mitochondrial processing peptidase [Solanum tuberosum]
Length = 534
Score = 115 bits (288), Expect = 6e-25
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = -1
Query: 518 QLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRT 339
QL+TYGRRIP+AELF+RID+VD TIKRV NRFI+D+D+AI+A GPIQ LPDYNWFRRRT
Sbjct: 470 QLITYGRRIPYAELFSRIDSVDTGTIKRVRNRFIFDRDVAISARGPIQDLPDYNWFRRRT 529
Query: 338 YWNRY 324
YW RY
Sbjct: 530 YWLRY 534
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 565,154,900
Number of Sequences: 1393205
Number of extensions: 11760533
Number of successful extensions: 24351
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 23680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24332
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
