Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001335A_C01 KMC001335A_c01
(702 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200582.1| putative protein; protein id: At5g57740.1 [Arab... 99 7e-20
sp|Q90508|VIT1_FUNHE Vitellogenin I precursor (VTG I) [Contains:... 37 0.20
gb|EAA11214.1| agCP6571 [Anopheles gambiae str. PEST] 36 0.46
dbj|BAC35548.1| unnamed protein product [Mus musculus] 35 0.78
gb|AAH24130.1| Similar to KIAA1853 protein [Mus musculus] 35 0.78
>ref|NP_200582.1| putative protein; protein id: At5g57740.1 [Arabidopsis thaliana]
gi|9759271|dbj|BAB09592.1| contains similarity to
ankyrin~gene_id:MRI1.10 [Arabidopsis thaliana]
Length = 468
Score = 98.6 bits (244), Expect = 7e-20
Identities = 69/144 (47%), Positives = 89/144 (60%), Gaps = 8/144 (5%)
Frame = -3
Query: 700 IVSFAKLPDTRPLPKEMQRT-TNLSLTFCTCSSEVLGDADMTTPF--CKPTSSR-GSKSS 533
IVSF KLP T + + T++SL+FCTCSS+VL A +T P CKP SR GS++
Sbjct: 335 IVSFTKLPHTTATTRTSTSSRTSISLSFCTCSSDVLDTALLTNPHYSCKPVVSRTGSRTP 394
Query: 532 SPSRS--FRSMSCQSRFSSFRINPSLCLG-ADVSPSLVPCSRSLRNNLARCSGSGFRRSS 362
+RS FRS+SC+ R PSLCLG +DV P SR + + +R SG GFRRS+
Sbjct: 395 QSARSSAFRSLSCR------RFPPSLCLGGSDVDE---PRSRLIGGSYSR-SGVGFRRST 444
Query: 361 SQTERRKSWFCSLNQSVAT-GSGC 293
SQ E ++SWF +LN V T GS C
Sbjct: 445 SQVEGKRSWFSALNHCVTTGGSAC 468
>sp|Q90508|VIT1_FUNHE Vitellogenin I precursor (VTG I) [Contains: Lipovitellin 1 (LV1);
Phosvitin (PV); Lipovitellin 2 (LV2)]
gi|11277189|pir||T43141 vitellogenin 1 - mummichog
gi|459202|gb|AAA93123.1| vitellogenin 1
Length = 1704
Score = 37.4 bits (85), Expect = 0.20
Identities = 31/82 (37%), Positives = 41/82 (49%)
Frame = -3
Query: 559 TSSRGSKSSSPSRSFRSMSCQSRFSSFRINPSLCLGADVSPSLVPCSRSLRNNLARCSGS 380
+SS S SSS SRS RS S S SS R + + L A + S SR R++ + S S
Sbjct: 1084 SSSSSSSSSSESRSSRSSSSSS--SSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSS 1141
Query: 379 GFRRSSSQTERRKSWFCSLNQS 314
SSS + R+S S + S
Sbjct: 1142 SSSSSSSSSSSRRSSSSSSSSS 1163
>gb|EAA11214.1| agCP6571 [Anopheles gambiae str. PEST]
Length = 2441
Score = 36.2 bits (82), Expect = 0.46
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -3
Query: 667 PLPKEMQRTTNLSLTFCTCSSEVLGDADMTT-PFCKPTSSRGSKSSSPSRSFRSMSCQSR 491
P+ K+ S T +S G + TT P KP + +G +P + + S ++
Sbjct: 1382 PVYKQDAMAAKQSPAAQTTTSPAAGQSVPTTSPSTKPAAGQGPSGGAPGAAASAQSGSNK 1441
Query: 490 FSSFR-INPSLCLGADVSPSLVPCSRSLRNNLARCSGSGFRRSSSQTERR 344
F +F +N + D +P + R +G+G RR S + R
Sbjct: 1442 FGAFSPVNETSVYSFDKEEDFMPVATPFRRQHGPATGAGGRRESCNSSAR 1491
>dbj|BAC35548.1| unnamed protein product [Mus musculus]
Length = 608
Score = 35.4 bits (80), Expect = 0.78
Identities = 32/89 (35%), Positives = 40/89 (43%)
Frame = -3
Query: 574 PFCKPTSSRGSKSSSPSRSFRSMSCQSRFSSFRINPSLCLGADVSPSLVPCSRSLRNNLA 395
P+ +P+ S S SS S + S S S SS +PS SPS SRS +
Sbjct: 514 PYYRPSPSSSSSLSSASSWYSSSSSSSSSSSR--SPSRSYSRSRSPSRSHSSRSQTRSRT 571
Query: 394 RCSGSGFRRSSSQTERRKSWFCSLNQSVA 308
R S S RS S R +S SL+ S A
Sbjct: 572 RTSRSSSSRSLSLGSRSRSRNRSLSYSSA 600
>gb|AAH24130.1| Similar to KIAA1853 protein [Mus musculus]
Length = 120
Score = 35.4 bits (80), Expect = 0.78
Identities = 32/89 (35%), Positives = 40/89 (43%)
Frame = -3
Query: 574 PFCKPTSSRGSKSSSPSRSFRSMSCQSRFSSFRINPSLCLGADVSPSLVPCSRSLRNNLA 395
P+ +P+ S S SS S + S S S SS +PS SPS SRS +
Sbjct: 26 PYYRPSPSSSSSLSSASSWYSSSSSSSSSSSR--SPSRSYSRSRSPSRSHSSRSQTRSRT 83
Query: 394 RCSGSGFRRSSSQTERRKSWFCSLNQSVA 308
R S S RS S R +S SL+ S A
Sbjct: 84 RTSRSSSSRSLSLGSRSRSRNRSLSYSSA 112
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 595,879,593
Number of Sequences: 1393205
Number of extensions: 12944858
Number of successful extensions: 40997
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40801
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
