>KMC001326A_C01 KMC001326A_c01
AGAAATAAACTTCTAATTTCCCTTTTTTTATGTAAAATTGACAAAAAAAACCATAAACTT
TATCATTTAGAATCAAACCCTCTTGAAAGAAAAATGTATCAAAATACCCCCAAAAGATGC
CATTTCTGCAGACAAAATAGCCCCTACACCTTAGCTCTATCCAACCAACCTATAGATTTT
ACCCCCAAACAAAAAAAAAAACCCTGGCTAAGTAGGCACCTGTAACTTATTGCAATATTT
GCAAATGCAGGGTTCCAATAGAAACCCACCCTCTTTCACTCCAAAATCACCAGCCTTCTT
TAAAAACAAGGGGAAAATGTTACTAGCCATCTGCCATAAAAAAAATATGTAACTGGGATC
TATCGATGATACAACTGAAAATCACGCTTCAGATCTGGAGTCAGAAGAACTCGTTTCAGC
AGGAGCTCCATGCAAGTTAGTGGCATAAGATTCAAAAAATGTGGACAACTTGGGCTGCAT
TCCCTGACATAGCTTTAATGTAGTTGTGCCCAGCTTCATGCACTCCTGATAGAAGGCATT
ATCTCCTCTTCTGTAAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001326A_C01 KMC001326A_c01
         (557 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00128823.1| hypothetical protein [Desulfovibrio desulfuri...    33  2.4
ref|XP_242314.1| hypothetical protein XP_242314 [Rattus norvegicus]    32  4.0
gb|EAA15375.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium y...    31  9.0

>ref|ZP_00128823.1| hypothetical protein [Desulfovibrio desulfuricans G20]
          Length = 388

 Score = 33.1 bits (74), Expect = 2.4
 Identities = 14/43 (32%), Positives = 25/43 (57%)
 Frame = +2

Query: 317 MLLAICHKKNM*LGSIDDTTENHASDLESEELVSAGAPCKLVA 445
           ++LA+CH++ + + S DDTTE H ++   E +  +  P    A
Sbjct: 226 VILAMCHRRGIPVASHDDTTEEHVAEAVREGITISEFPTTAAA 268

>ref|XP_242314.1| hypothetical protein XP_242314 [Rattus norvegicus]
          Length = 194

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 464 PHFLNLMPLTCMELLLKRVLLTPDLKRDFQLYHR*IPVTYFFYG 333
           PH  N+  L C   L+  +L T  +K  F L HR I ++ F++G
Sbjct: 70  PHVGNVSELRCPTPLVPALLQTGSIKTHFPLVHRVIGMSVFYWG 113

>gb|EAA15375.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
          Length = 1555

 Score = 31.2 bits (69), Expect = 9.0
 Identities = 17/54 (31%), Positives = 26/54 (47%)
 Frame = +2

Query: 251 GSNRNPPSFTPKSPAFFKNKGKMLLAICHKKNM*LGSIDDTTENHASDLESEEL 412
           G+N N P  T K  +     GK+L  I    +M     D+ T ++ S++  EEL
Sbjct: 300 GNNNNKPDQTDKKGSNVNKNGKVLRRIDDNSHMKQEQTDNATYDNKSEINEEEL 353

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,392,049
Number of Sequences: 1393205
Number of extensions: 10929825
Number of successful extensions: 24052
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24050
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL026h02_f BP053636 1 492 2 GENLf090c07 BP067259 19 580 3 MFBL052c04_f BP043921 19 463 4 MRL047e01_f BP085982 19 370 5 MFBL002e10_f BP041379 19 576 6 GENLf087g12 BP067110 19 541 7 MPDL009c04_f AV776966 22 270 8 MRL012g04_f BP084338 30 533 9 SPDL016e10_f BP053000 37 333 10 GENLf075e02 BP066415 89 575

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