Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001322A_C01 KMC001322A_c01
(545 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA07235.1| extensin [Cicer arietinum] 68 6e-11
ref|NP_181844.1| putative extensin; protein id: At2g43150.1 [Ara... 60 2e-08
pir||S25298 extensin (clone Tom J-10) - tomato gi|170442|gb|AAA3... 59 4e-08
pir||C29356 hydroxyproline-rich glycoprotein (clone Hyp2.13) - k... 59 5e-08
pir||T07623 extensin homolog HRGP2 - soybean (fragment) gi|34745... 57 2e-07
>emb|CAA07235.1| extensin [Cicer arietinum]
Length = 192
Score = 68.2 bits (165), Expect = 6e-11
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -3
Query: 543 TYIYXSPPPPTKSPPPPVYIYASPPPPIYK 454
TYIY SPPPP KSPPPPVYIYASPPPPIYK
Sbjct: 163 TYIYKSPPPPVKSPPPPVYIYASPPPPIYK 192
Score = 49.3 bits (116), Expect = 3e-05
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPPT SPPPP Y Y SPPPPI
Sbjct: 116 YYYKSPPPPTSSPPPP-YHYVSPPPPI 141
Score = 46.6 bits (109), Expect = 2e-04
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP KSPPPP Y Y SPPPP
Sbjct: 132 YHYVSPPPPIKSPPPP-YHYTSPPPP 156
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 52 YYYHSPPPPSPSPPPP-YYYKSPPPP 76
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 68 YYYKSPPPPSPSPPPP-YYYKSPPPP 92
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 20 YYYKSPPPPSPSPPPP-YYYKSPPPP 44
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 4 YYYHSPPPPSPSPPPP-YYYKSPPPP 28
Score = 45.8 bits (107), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 36 YYYKSPPPPSPSPPPP-YYYHSPPPP 60
Score = 45.4 bits (106), Expect = 4e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 84 YYYKSPPPPSPSPPPP-YHYQSPPPP 108
Score = 32.7 bits (73), Expect = 2.9
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 8/30 (26%)
Frame = -3
Query: 528 SPPPPTK--SPPPP------VYIYASPPPP 463
SPPPP SPPPP Y Y SPPPP
Sbjct: 95 SPPPPYHYQSPPPPSPTPRTPYYYKSPPPP 124
>ref|NP_181844.1| putative extensin; protein id: At2g43150.1 [Arabidopsis thaliana]
gi|25307798|pir||F84862 probable extensin [imported] -
Arabidopsis thaliana gi|3763924|gb|AAC64304.1| putative
extensin [Arabidopsis thaliana]
Length = 212
Score = 60.1 bits (144), Expect = 2e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPIY 457
Y+Y SPPPP KSPPPPVYIYASPPPP +
Sbjct: 184 YLYSSPPPPVKSPPPPVYIYASPPPPTH 211
Score = 51.6 bits (122), Expect = 6e-06
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y+Y+SPPPP+
Sbjct: 72 YYYHSPPPPVKSPPPP-YVYSSPPPPV 97
Score = 51.2 bits (121), Expect = 8e-06
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y+Y+SPPPP+
Sbjct: 168 YYYHSPPPPVKSPPPP-YLYSSPPPPV 193
Score = 50.8 bits (120), Expect = 1e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y+Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 88 YVYSSPPPPVKSPPPP-YYYHSPPPPV 113
Score = 48.9 bits (115), Expect = 4e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 120 YYYHSPPPPVKSPPPP-YYYHSPPPPV 145
Score = 48.9 bits (115), Expect = 4e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 136 YYYHSPPPPVKSPPPP-YYYHSPPPPV 161
Score = 48.9 bits (115), Expect = 4e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 104 YYYHSPPPPVKSPPPP-YYYHSPPPPV 129
Score = 48.9 bits (115), Expect = 4e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 152 YYYHSPPPPVKSPPPP-YYYHSPPPPV 177
Score = 48.1 bits (113), Expect = 7e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 56 YEYKSPPPPVKSPPPP-YYYHSPPPPV 81
Score = 47.8 bits (112), Expect = 9e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP KSPPPP Y Y SPPPP+
Sbjct: 40 YEYKSPPPPVKSPPPP-YEYKSPPPPV 65
>pir||S25298 extensin (clone Tom J-10) - tomato gi|170442|gb|AAA34163.1|
extensin (class I)
Length = 388
Score = 58.9 bits (141), Expect = 4e-08
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPIY 457
Y Y SPPPP KSPPPPVYIY SPPPP++
Sbjct: 360 YYYSSPPPPVKSPPPPVYIYGSPPPPVH 387
Score = 48.1 bits (113), Expect = 7e-05
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP SPPPP Y Y+SPPPP+
Sbjct: 344 YYYHSPPPPVNSPPPP-YYYSSPPPPV 369
Score = 47.8 bits (112), Expect = 9e-05
Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 5/31 (16%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPVYIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y Y SPPPP
Sbjct: 226 YVYKSPPPPSPKYVYKSPPPPPYYYKSPPPP 256
Score = 47.0 bits (110), Expect = 1e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPI 460
Y Y SPPPP+ SPPPP Y Y SPPPP+
Sbjct: 328 YYYKSPPPPSPSPPPP-YYYHSPPPPV 353
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 248 YYYKSPPPPSPSPPPP-YYYKSPPPP 272
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 280 YYYKSPPPPSPSPPPP-YYYKSPPPP 304
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 264 YYYKSPPPPSPSPPPP-YYYKSPPPP 288
Score = 45.8 bits (107), Expect = 3e-04
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 7/35 (20%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPPIY 457
Y+Y SPPPP+ KSPPPP Y+Y SPPPP Y
Sbjct: 214 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPPPY 248
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 82 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 114
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y+Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 142 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 174
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 70 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 102
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 154 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 186
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 166 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 198
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 178 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 210
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y+Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 34 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 66
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 130 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 162
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y+Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 118 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 150
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 58 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 90
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 106 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 138
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y+Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 202 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 234
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 190 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 222
Score = 44.3 bits (103), Expect = 0.001
Identities = 18/26 (69%), Positives = 19/26 (72%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y PPPP
Sbjct: 296 YYYKSPPPPSPSPPPP-YYYKCPPPP 320
Score = 44.3 bits (103), Expect = 0.001
Identities = 18/26 (69%), Positives = 19/26 (72%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y PPPP+ SPPPP Y Y SPPPP
Sbjct: 312 YYYKCPPPPSPSPPPP-YYYKSPPPP 336
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y+Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 94 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 126
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 46 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 78
Score = 44.3 bits (103), Expect = 0.001
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPPPV--YIYASPPPP 463
Y+Y SPPPP+ KSPPPP Y+Y SPPPP
Sbjct: 22 YVYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 54
Score = 42.7 bits (99), Expect = 0.003
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 7/33 (21%)
Frame = -3
Query: 540 YIYXSPPPPT-----KSPPP--PVYIYASPPPP 463
Y Y SPPPP+ KSPPP P Y+Y SPPPP
Sbjct: 10 YYYKSPPPPSPKYVYKSPPPPSPKYVYKSPPPP 42
>pir||C29356 hydroxyproline-rich glycoprotein (clone Hyp2.13) - kidney bean
(fragment) gi|169349|gb|AAA33765.1| hydroxyproline-rich
glycoprotein
Length = 368
Score = 58.5 bits (140), Expect = 5e-08
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPPIY 457
Y Y SPPPPTKSPPPP Y YASPPPP Y
Sbjct: 340 YYYVSPPPPTKSPPPPAYSYASPPPPTY 367
Score = 46.6 bits (109), Expect = 2e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 324 YYYKSPPPPSPSPPPPYY-YVSPPPP 348
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 158 YYYKSPPPPSPSPPPP-YYYKSPPPP 182
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 292 YYYKSPPPPSPSPPPP-YYYKSPPPP 316
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 206 YYYKSPPPPSPSPPPP-YYYKSPPPP 230
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 222 YYYKSPPPPSPSPPPP-YYYKSPPPP 246
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 174 YYYKSPPPPSPSPPPP-YYYKSPPPP 198
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 276 YYYKSPPPPSPSPPPP-YYYKSPPPP 300
Score = 45.4 bits (106), Expect = 4e-04
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP SPPPP Y Y SPPPP
Sbjct: 190 YYYKSPPPPDPSPPPP-YYYKSPPPP 214
Score = 45.4 bits (106), Expect = 4e-04
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP SPPPP Y Y SPPPP
Sbjct: 260 YYYKSPPPPDPSPPPP-YYYKSPPPP 284
Score = 43.9 bits (102), Expect = 0.001
Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPP-----PVYIYASPPPP 463
Y Y SPPPP+ SPPP P Y Y SPPPP
Sbjct: 238 YYYKSPPPPSPSPPPSPSPPPPYYYKSPPPP 268
Score = 42.0 bits (97), Expect = 0.005
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP K P P Y Y SPPPP
Sbjct: 141 YYYKSPPPPHKDPYYPPYYYKSPPPP 166
Score = 41.6 bits (96), Expect = 0.006
Identities = 17/26 (65%), Positives = 18/26 (68%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ PP P Y Y SPPPP
Sbjct: 308 YYYKSPPPPSPDPPTP-YYYKSPPPP 332
Score = 37.4 bits (85), Expect = 0.12
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 14/40 (35%)
Frame = -3
Query: 540 YIYXSPPPP---------TKSPPPP-----VYIYASPPPP 463
Y Y SPPPP KSPPPP Y Y SPPPP
Sbjct: 110 YYYNSPPPPYYYKSPPYYYKSPPPPSPSPSPYYYKSPPPP 149
>pir||T07623 extensin homolog HRGP2 - soybean (fragment)
gi|347455|gb|AAA33971.1| hydroxyproline-rich
glycoprotein
Length = 169
Score = 56.6 bits (135), Expect = 2e-07
Identities = 26/38 (68%), Positives = 27/38 (70%), Gaps = 9/38 (23%)
Frame = -3
Query: 540 YIYXSPPPPT---------KSPPPPVYIYASPPPPIYK 454
Y Y SPPPP+ KSPPPPVYIYASPPPPIYK
Sbjct: 132 YHYTSPPPPSPAPAPKYIYKSPPPPVYIYASPPPPIYK 169
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 68 YYYKSPPPPSPSPPPP-YYYKSPPPP 92
Score = 46.2 bits (108), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 4 YYYHSPPPPSPSPPPP-YYYKSPPPP 28
Score = 45.8 bits (107), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 36 YYYHSPPPPSPSPPPP-YYYHSPPPP 60
Score = 45.8 bits (107), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPPPP Y Y SPPPP
Sbjct: 20 YYYKSPPPPSPSPPPP-YYYHSPPPP 44
Score = 45.4 bits (106), Expect = 4e-04
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPPT PPPP Y Y SPPPP
Sbjct: 100 YYYKSPPPPTSYPPPP-YHYVSPPPP 124
Score = 43.1 bits (100), Expect = 0.002
Identities = 18/26 (69%), Positives = 19/26 (72%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ SPP P Y Y SPPPP
Sbjct: 52 YYYHSPPPPSPSPPSP-YYYKSPPPP 76
Score = 38.5 bits (88), Expect = 0.053
Identities = 16/26 (61%), Positives = 18/26 (68%)
Frame = -3
Query: 540 YIYXSPPPPTKSPPPPVYIYASPPPP 463
Y Y SPPPP+ + PP Y Y SPPPP
Sbjct: 84 YYYKSPPPPSPTSHPP-YYYKSPPPP 108
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,152,240
Number of Sequences: 1393205
Number of extensions: 10068093
Number of successful extensions: 91244
Number of sequences better than 10.0: 514
Number of HSP's better than 10.0 without gapping: 40752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72917
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
