Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001318A_C01 KMC001318A_c01
(607 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B85089 receptor protein kinase-like protein [imported] - Ar... 141 7e-33
gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana] 141 7e-33
ref|NP_192625.2| receptor protein kinase-like protein; protein i... 141 7e-33
gb|AAL31656.1|AC079179_11 Putative protein kinase [Oryza sativa]... 137 1e-31
ref|NP_174809.1| leucine-rich repeat transmembrane protein kinas... 135 5e-31
>pir||B85089 receptor protein kinase-like protein [imported] - Arabidopsis
thaliana gi|7267528|emb|CAB78010.1| receptor protein
kinase-like protein [Arabidopsis thaliana]
gi|7321074|emb|CAB82121.1| receptor protein kinase-like
protein [Arabidopsis thaliana]
Length = 1027
Score = 141 bits (355), Expect = 7e-33
Identities = 75/137 (54%), Positives = 90/137 (64%)
Frame = -1
Query: 604 NVLLDLQYEAHVSDFGTAKFLKPGSHTWTAFAGTFGYAAPELAQTMQVNEKCDVYSFGVF 425
N+LL YEA +SDFGTAK LKP S W+A AGT+GY APELA M+V EKCDVYSFGV
Sbjct: 892 NILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVL 951
Query: 424 ALEIIMGMHPGDLISSLMSPSTVPMVNDLLLIDILDQRPHQVEKPIDEEVILIASLALAC 245
LE+I G HPGDL+S+L S+ P L L I D R + I EEV+ I +AL C
Sbjct: 952 TLEVIKGEHPGDLVSTL---SSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1008
Query: 244 LRKNPHSRPTMDQVSKA 194
L +P +RPTM +S A
Sbjct: 1009 LHSDPQARPTMLSISTA 1025
>gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana]
Length = 1045
Score = 141 bits (355), Expect = 7e-33
Identities = 75/137 (54%), Positives = 90/137 (64%)
Frame = -1
Query: 604 NVLLDLQYEAHVSDFGTAKFLKPGSHTWTAFAGTFGYAAPELAQTMQVNEKCDVYSFGVF 425
N+LL YEA +SDFGTAK LKP S W+A AGT+GY APELA M+V EKCDVYSFGV
Sbjct: 910 NILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVL 969
Query: 424 ALEIIMGMHPGDLISSLMSPSTVPMVNDLLLIDILDQRPHQVEKPIDEEVILIASLALAC 245
LE+I G HPGDL+S+L S+ P L L I D R + I EEV+ I +AL C
Sbjct: 970 TLEVIKGEHPGDLVSTL---SSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1026
Query: 244 LRKNPHSRPTMDQVSKA 194
L +P +RPTM +S A
Sbjct: 1027 LHSDPQARPTMLSISTA 1043
>ref|NP_192625.2| receptor protein kinase-like protein; protein id: At4g08850.1,
supported by cDNA: gi_18086326 [Arabidopsis thaliana]
Length = 1045
Score = 141 bits (355), Expect = 7e-33
Identities = 75/137 (54%), Positives = 90/137 (64%)
Frame = -1
Query: 604 NVLLDLQYEAHVSDFGTAKFLKPGSHTWTAFAGTFGYAAPELAQTMQVNEKCDVYSFGVF 425
N+LL YEA +SDFGTAK LKP S W+A AGT+GY APELA M+V EKCDVYSFGV
Sbjct: 910 NILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVL 969
Query: 424 ALEIIMGMHPGDLISSLMSPSTVPMVNDLLLIDILDQRPHQVEKPIDEEVILIASLALAC 245
LE+I G HPGDL+S+L S+ P L L I D R + I EEV+ I +AL C
Sbjct: 970 TLEVIKGEHPGDLVSTL---SSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1026
Query: 244 LRKNPHSRPTMDQVSKA 194
L +P +RPTM +S A
Sbjct: 1027 LHSDPQARPTMLSISTA 1043
>gb|AAL31656.1|AC079179_11 Putative protein kinase [Oryza sativa]
gi|20042882|gb|AAM08710.1|AC116601_3 Putative protein
kinase [Oryza sativa]
Length = 628
Score = 137 bits (345), Expect = 1e-31
Identities = 69/159 (43%), Positives = 101/159 (63%)
Frame = -1
Query: 604 NVLLDLQYEAHVSDFGTAKFLKPGSHTWTAFAGTFGYAAPELAQTMQVNEKCDVYSFGVF 425
N+LLD ++A+VSDFGTA+ LKP S W+A AGT+GY APEL+ T V EKCDVYSFGV
Sbjct: 471 NILLDTAFKAYVSDFGTARILKPDSSNWSALAGTYGYIAPELSFTCVVTEKCDVYSFGVV 530
Query: 424 ALEIIMGMHPGDLISSLMSPSTVPMVNDLLLIDILDQRPHQVEKPIDEEVILIASLALAC 245
LE++MG HP +L+ +L+S L+ +ILD+RP +E + ++ +A++C
Sbjct: 531 VLEVVMGKHPMELLQTLLSSEQ----QHTLVKEILDERPTAPTTAEEESIEILIKVAISC 586
Query: 244 LRKNPHSRPTMDQVSKALVLGKPPLALGYQFPMVRVGQL 128
L +PH+RPTM + + L+ + +F V + QL
Sbjct: 587 LEASPHARPTMMEAYQTLIQQHSSSSCPIRFNEVTLEQL 625
>ref|NP_174809.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g35710.1 [Arabidopsis thaliana]
gi|25518391|pir||B86479 hypothetical protein F14D7.1 -
Arabidopsis thaliana gi|8778966|gb|AAF79881.1|AC021198_1
Contains similarity to receptor protein kinase-like
protein from Arabidopsis thaliana gb|AL161513. It
contains a eukaryotic protein kinase domain PF|00069.
EST gb|AI997574 comes from this gene
Length = 1120
Score = 135 bits (339), Expect = 5e-31
Identities = 71/135 (52%), Positives = 88/135 (64%)
Frame = -1
Query: 604 NVLLDLQYEAHVSDFGTAKFLKPGSHTWTAFAGTFGYAAPELAQTMQVNEKCDVYSFGVF 425
N+LLD Y A +SDFGTAK LK S W+A AGT+GY APE A TM+V EKCDVYSFGV
Sbjct: 986 NILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVL 1045
Query: 424 ALEIIMGMHPGDLISSLMSPSTVPMVNDLLLIDILDQRPHQVEKPIDEEVILIASLALAC 245
LE+I+G HPGDL+SSL S L L I D+R + E+++ + +AL C
Sbjct: 1046 ILELIIGKHPGDLVSSLSSSPG----EALSLRSISDERVLEPRGQNREKLLKMVEMALLC 1101
Query: 244 LRKNPHSRPTMDQVS 200
L+ NP SRPTM +S
Sbjct: 1102 LQANPESRPTMLSIS 1116
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 532,829,024
Number of Sequences: 1393205
Number of extensions: 11617341
Number of successful extensions: 39856
Number of sequences better than 10.0: 5381
Number of HSP's better than 10.0 without gapping: 34838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36163
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
