Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001308A_C01 KMC001308A_c01
(558 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB89740.1| putative respiratory burst oxidase protein [Oryz... 95 5e-19
dbj|BAB08369.1| respiratory burst oxidase protein [Arabidopsis t... 95 5e-19
emb|CAC87256.1| NADPH oxidase [Nicotiana tabacum] 83 2e-15
dbj|BAC56864.1| respiratory burst oxidase homolog [Nicotiana ben... 83 3e-15
dbj|BAB70750.1| respiratory burst oxidase homolog [Solanum tuber... 82 4e-15
>dbj|BAB89740.1| putative respiratory burst oxidase protein [Oryza sativa (japonica
cultivar-group)]
Length = 843
Score = 95.1 bits (235), Expect = 5e-19
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = -3
Query: 526 QIRTHFGIPNWEKVFTPLASAHPNSRIGVFYCGSPALTKTLKSLCQETSLNSSTRFQFHK 347
+IRTHF PNW KVF+ LA+AH NSRIGVFYCGSP LTK LK L +E S ++TRF FHK
Sbjct: 781 RIRTHFARPNWRKVFSDLANAHKNSRIGVFYCGSPTLTKQLKDLSKEFSQTTTTRFHFHK 840
Query: 346 ENY 338
EN+
Sbjct: 841 ENF 843
>dbj|BAB08369.1| respiratory burst oxidase protein [Arabidopsis thaliana]
Length = 886
Score = 95.1 bits (235), Expect = 5e-19
Identities = 44/67 (65%), Positives = 50/67 (73%)
Frame = -3
Query: 538 VTLCQIRTHFGIPNWEKVFTPLASAHPNSRIGVFYCGSPALTKTLKSLCQETSLNSSTRF 359
V+ +IRTHF PNW KVF+ L+S H RIGVFYCGSP L + LK LCQE SL SSTRF
Sbjct: 820 VSESRIRTHFARPNWRKVFSELSSKHEACRIGVFYCGSPTLVRPLKELCQEFSLESSTRF 879
Query: 358 QFHKENY 338
FHKEN+
Sbjct: 880 TFHKENF 886
>emb|CAC87256.1| NADPH oxidase [Nicotiana tabacum]
Length = 962
Score = 83.2 bits (204), Expect = 2e-15
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = -3
Query: 526 QIRTHFGIPNWEKVFTPLASAHPNSRIGVFYCGSPALTKTLKSLCQETSLNSSTRFQFHK 347
++RTHF PNW+KVF+ + H N+RIGVFYCG+P L K L LC+E + +T+F+FHK
Sbjct: 900 RVRTHFARPNWKKVFSKTLTKHANARIGVFYCGAPVLAKELSKLCKEYNQKGATKFEFHK 959
Query: 346 ENY 338
E++
Sbjct: 960 EHF 962
>dbj|BAC56864.1| respiratory burst oxidase homolog [Nicotiana benthamiana]
Length = 962
Score = 82.8 bits (203), Expect = 3e-15
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = -3
Query: 526 QIRTHFGIPNWEKVFTPLASAHPNSRIGVFYCGSPALTKTLKSLCQETSLNSSTRFQFHK 347
++RTHF PNW+KVF+ + H N+RIGVFYCG+P L K L LC+E + +T+F+FHK
Sbjct: 900 RVRTHFARPNWKKVFSKTLTKHANARIGVFYCGAPILAKELSKLCKEYNQKGATKFEFHK 959
Query: 346 ENY 338
E++
Sbjct: 960 EHF 962
>dbj|BAB70750.1| respiratory burst oxidase homolog [Solanum tuberosum]
Length = 963
Score = 82.0 bits (201), Expect = 4e-15
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = -3
Query: 523 IRTHFGIPNWEKVFTPLASAHPNSRIGVFYCGSPALTKTLKSLCQETSLNSSTRFQFHKE 344
+RTHF PNW KVF+ + H N+RIGVFYCG+P L K L LC+E + +T+F+FHKE
Sbjct: 902 VRTHFARPNWRKVFSKTLTKHANARIGVFYCGAPILAKELSKLCKEFNQKGTTKFEFHKE 961
Query: 343 NY 338
++
Sbjct: 962 HF 963
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,909,791
Number of Sequences: 1393205
Number of extensions: 8774091
Number of successful extensions: 23843
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 22524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23662
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
